Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
TRAV12-3A0A0B4J271 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
TRAV12-3A0A0B4J271 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 AC011298.3-201ENST00000615796 283 ntBASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 AC136469.2-201ENST00000623944 1028 ntBASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 GOLGA2P6-201ENST00000340929 2049 ntBASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 AC026310.3-201ENST00000625186 2373 ntBASIC15.83■□□□□ 0.12
TRAV12-3A0A0B4J271 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 AC244015.2-201ENST00000616358 1861 ntBASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 AC131212.1-201ENST00000613771 668 ntBASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAV12-3A0A0B4J271 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV12-3A0A0B4J271 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV12-3A0A0B4J271 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV12-3A0A0B4J271 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV12-3A0A0B4J271 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV12-3A0A0B4J271 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TRAV12-3A0A0B4J271 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV12-3A0A0B4J271 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRAV12-3A0A0B4J271 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV12-3A0A0B4J271 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRAV12-3A0A0B4J271 OXCT2P1-201ENST00000447263 1535 ntBASIC15.81■□□□□ 0.12
TRAV12-3A0A0B4J271 SLC47A1P1-202ENST00000449666 945 ntBASIC15.81■□□□□ 0.12
TRAV12-3A0A0B4J271 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV12-3A0A0B4J271 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV12-3A0A0B4J271 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TRAV12-3A0A0B4J271 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV12-3A0A0B4J271 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 AC026471.6-201ENST00000622954 1905 ntBASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV12-3A0A0B4J271 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
TRAV12-3A0A0B4J271 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV12-3A0A0B4J271 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV12-3A0A0B4J271 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV12-3A0A0B4J271 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
TRAV12-3A0A0B4J271 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms