Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-43A0A0A6YXN5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.42■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.42■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Gm12527-201ENSMUST00000117967 564 ntBASIC17.41■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.41■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-43A0A0A6YXN5 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-43A0A0A6YXN5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.4■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Iqck-206ENSMUST00000208658 2891 ntBASIC17.4■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Gm10653-202ENSMUST00000139570 835 ntBASIC17.39■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.39■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Gm20760-201ENSMUST00000179197 648 ntBASIC17.39■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Gm20049-201ENSMUST00000219950 730 ntBASIC17.39■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-43A0A0A6YXN5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.38■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.38■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.38■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.37■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.37■□□□□ 0.37
Ighv1-43A0A0A6YXN5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.37■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.37■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-43A0A0A6YXN5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-43A0A0A6YXN5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-43A0A0A6YXN5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-43A0A0A6YXN5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-43A0A0A6YXN5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms