Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav21-dv12A0A075B6C4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav21-dv12A0A075B6C4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav21-dv12A0A075B6C4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.46□□□□□ -0.1
Trav21-dv12A0A075B6C4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav21-dv12A0A075B6C4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Gm27454-201ENSMUST00000185090 204 ntBASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav21-dv12A0A075B6C4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav21-dv12A0A075B6C4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav21-dv12A0A075B6C4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav21-dv12A0A075B6C4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav21-dv12A0A075B6C4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav21-dv12A0A075B6C4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav21-dv12A0A075B6C4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav21-dv12A0A075B6C4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav21-dv12A0A075B6C4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav21-dv12A0A075B6C4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav21-dv12A0A075B6C4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav21-dv12A0A075B6C4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav21-dv12A0A075B6C4 Smad6-203ENSMUST00000179458 273 ntBASIC14.44□□□□□ -0.1
Trav21-dv12A0A075B6C4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav21-dv12A0A075B6C4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav21-dv12A0A075B6C4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav21-dv12A0A075B6C4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav21-dv12A0A075B6C4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav21-dv12A0A075B6C4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav21-dv12A0A075B6C4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav21-dv12A0A075B6C4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav21-dv12A0A075B6C4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav21-dv12A0A075B6C4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav21-dv12A0A075B6C4 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.42□□□□□ -0.1
Trav21-dv12A0A075B6C4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav21-dv12A0A075B6C4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav21-dv12A0A075B6C4 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.42□□□□□ -0.1
Trav21-dv12A0A075B6C4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav21-dv12A0A075B6C4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.42□□□□□ -0.1
Trav21-dv12A0A075B6C4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav21-dv12A0A075B6C4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav21-dv12A0A075B6C4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav21-dv12A0A075B6C4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav21-dv12A0A075B6C4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav21-dv12A0A075B6C4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav21-dv12A0A075B6C4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav21-dv12A0A075B6C4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav21-dv12A0A075B6C4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Trav21-dv12A0A075B6C4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav21-dv12A0A075B6C4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Trav21-dv12A0A075B6C4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav21-dv12A0A075B6C4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav21-dv12A0A075B6C4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav21-dv12A0A075B6C4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms