Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 HNRNPA1P69-201ENST00000552536 933 ntBASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 AC012236.1-202ENST00000558388 1024 ntTSL 2 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 AC087878.1-201ENST00000560709 574 ntTSL 4 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 AC091167.3-201ENST00000561573 3838 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 AC007533.1-201ENST00000564739 870 ntTSL 3 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 AC010601.1-201ENST00000569048 446 ntTSL 5 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 CISTR-201ENST00000570015 581 ntTSL 2 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 MIR3943-201ENST00000585069 100 ntBASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 ZNF544-203ENST00000594384 588 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 AC005387.2-201ENST00000596596 440 ntTSL 3 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 AC010776.3-201ENST00000617349 424 ntBASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 AL589826.2-201ENST00000635423 993 ntTSL 5 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 ABHD11-AS1-202ENST00000641969 358 ntBASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 LARP4B-201ENST00000316157 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 GOSR2-237ENST00000640443 3929 ntTSL 5 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 GPR107-203ENST00000372410 6991 ntTSL 5 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 STAT1-212ENST00000540176 4216 ntTSL 5 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 APTX-215ENST00000468275 1455 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 CCPG1-201ENST00000310958 6822 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 GRIK3-201ENST00000373091 9101 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 ZNF326-201ENST00000340281 2729 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 C22orf23-206ENST00000619227 1777 ntTSL 3 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 ELOC-210ENST00000622804 1976 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 AL359075.2-201ENST00000354921 4998 ntTSL 2 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 ZSCAN29-202ENST00000396976 5595 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 CWC22-202ENST00000410053 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 NFIA-202ENST00000371184 1348 ntTSL 5 BASIC10.58□□□□□ -0.71
NPIPA3F8WFD2 EEF1GP4-201ENST00000467631 1307 ntBASIC10.58□□□□□ -0.71
NPIPA3F8WFD2 FAM71F1-201ENST00000315184 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 AC005537.1-203ENST00000629291 1748 ntTSL 5 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 LAMA4-205ENST00000389463 6297 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 AC068775.1-201ENST00000322446 2142 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 PTPN20-207ENST00000395725 2226 ntTSL 5 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 LINC00893-215ENST00000618757 2347 ntTSL 2 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 CICP26-201ENST00000425003 2448 ntBASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 FAM234A-201ENST00000301678 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 SCN5A-208ENST00000450102 6284 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 DIS3-205ENST00000545453 3651 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 TUSC5-201ENST00000333813 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 KBTBD3-205ENST00000531837 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 ZNRD1ASP-219ENST00000448093 2296 ntTSL 2 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 TCF7L2-223ENST00000629706 1755 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 BOLA3-AS1-203ENST00000533563 1599 ntTSL 2 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 IQCD-201ENST00000299732 1369 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 SNX13-202ENST00000409604 4146 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 CELA1-201ENST00000293636 952 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 ATP1A1-AS1-201ENST00000369491 773 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 BPIFA3-201ENST00000375452 983 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 MIR182-201ENST00000385255 110 ntBASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 KRTAP10-6-201ENST00000400368 1238 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 RPSAP45-201ENST00000401872 874 ntBASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 AL121949.1-201ENST00000402043 968 ntBASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 SLC6A1-AS1-201ENST00000414969 584 ntTSL 4 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 AC073370.1-201ENST00000441348 525 ntTSL 3 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 AC099796.2-201ENST00000444140 108 ntBASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 MRPL51P2-201ENST00000450190 376 ntBASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 RN7SL299P-201ENST00000464573 280 ntBASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 KLF3-AS1-205ENST00000507091 642 ntTSL 3 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 AC113410.2-201ENST00000507389 678 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 AC091965.1-201ENST00000512406 440 ntTSL 3 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 AC083841.3-202ENST00000519411 349 ntTSL 5 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 HNRNPCP6-201ENST00000525816 871 ntBASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 AC135977.1-201ENST00000526165 959 ntBASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 NUDT5-209ENST00000537776 1201 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 LINC02256-202ENST00000564670 543 ntTSL 4 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 AC018362.2-202ENST00000567089 562 ntTSL 3 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 CA5AP1-201ENST00000568175 576 ntBASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 AL160291.1-201ENST00000574842 1002 ntTSL 2 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 APOC1P1-204ENST00000575148 560 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 FGF11-205ENST00000575398 990 ntTSL 2 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 AC010761.4-201ENST00000577325 521 ntTSL 3 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 SNORD3C-201ENST00000580533 581 ntBASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 AC015563.1-201ENST00000581134 468 ntTSL 3 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 AC135983.5-201ENST00000604574 144 ntBASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 Metazoa_SRP.85-201ENST00000610909 260 ntBASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 AC013564.1-201ENST00000612806 707 ntBASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 FP236240.4-201ENST00000624353 373 ntBASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 LINC01702-203ENST00000635350 745 ntTSL 5 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 TOGARAM1-202ENST00000361577 6247 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 ATAT1-205ENST00000376483 2646 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 KCNK5-201ENST00000359534 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 SPRY2-202ENST00000377104 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 LMCD1-AS1-201ENST00000420095 2144 ntTSL 2 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 AC137834.1-201ENST00000548184 2107 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 FLNB-203ENST00000419752 2002 ntTSL 5 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 TIMM22-201ENST00000327158 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 ZNF185-209ENST00000449285 4328 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 CHRM1-201ENST00000306960 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 HNRNPR-203ENST00000374616 2691 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 NLK-203ENST00000582037 1503 ntTSL 2 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 TAF1C-203ENST00000541676 3502 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 CD5-201ENST00000347785 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 657.7 ms