Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA9Q9Y5G4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA9Q9Y5G4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA9Q9Y5G4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PCDHGA9Q9Y5G4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20■□□□□ 0.79
PCDHGA9Q9Y5G4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20■□□□□ 0.79
PCDHGA9Q9Y5G4 AL121832.2-201ENST00000610979 668 ntBASIC20■□□□□ 0.79
PCDHGA9Q9Y5G4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
PCDHGA9Q9Y5G4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PCDHGA9Q9Y5G4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA9Q9Y5G4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20■□□□□ 0.79
PCDHGA9Q9Y5G4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA9Q9Y5G4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA9Q9Y5G4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHGA9Q9Y5G4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA9Q9Y5G4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA9Q9Y5G4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PCDHGA9Q9Y5G4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHGA9Q9Y5G4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA9Q9Y5G4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA9Q9Y5G4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA9Q9Y5G4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDHGA9Q9Y5G4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA9Q9Y5G4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA9Q9Y5G4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA9Q9Y5G4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA9Q9Y5G4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA9Q9Y5G4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA9Q9Y5G4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA9Q9Y5G4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHGA9Q9Y5G4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA9Q9Y5G4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA9Q9Y5G4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.98■□□□□ 0.79
PCDHGA9Q9Y5G4 AC104187.1-201ENST00000607510 612 ntBASIC19.98■□□□□ 0.79
PCDHGA9Q9Y5G4 TMEM191A-211ENST00000637163 1067 ntBASIC19.98■□□□□ 0.79
PCDHGA9Q9Y5G4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA9Q9Y5G4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHGA9Q9Y5G4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHGA9Q9Y5G4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA9Q9Y5G4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PCDHGA9Q9Y5G4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA9Q9Y5G4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHGA9Q9Y5G4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PCDHGA9Q9Y5G4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHGA9Q9Y5G4 CD99P1-205ENST00000527459 561 ntBASIC19.97■□□□□ 0.79
PCDHGA9Q9Y5G4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.97■□□□□ 0.79
PCDHGA9Q9Y5G4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
PCDHGA9Q9Y5G4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA9Q9Y5G4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA9Q9Y5G4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA9Q9Y5G4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA9Q9Y5G4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PCDHGA9Q9Y5G4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PCDHGA9Q9Y5G4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHGA9Q9Y5G4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA9Q9Y5G4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA9Q9Y5G4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PCDHGA9Q9Y5G4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PCDHGA9Q9Y5G4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA9Q9Y5G4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA9Q9Y5G4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHGA9Q9Y5G4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.96■□□□□ 0.79
PCDHGA9Q9Y5G4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.96■□□□□ 0.79
PCDHGA9Q9Y5G4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PCDHGA9Q9Y5G4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
PCDHGA9Q9Y5G4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA9Q9Y5G4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGA9Q9Y5G4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGA9Q9Y5G4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA9Q9Y5G4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA9Q9Y5G4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA9Q9Y5G4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PCDHGA9Q9Y5G4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PCDHGA9Q9Y5G4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA9Q9Y5G4 AC007322.1-201ENST00000426983 750 ntBASIC19.95■□□□□ 0.78
PCDHGA9Q9Y5G4 TSPY6P-201ENST00000448518 926 ntBASIC19.95■□□□□ 0.78
PCDHGA9Q9Y5G4 AC083906.2-201ENST00000511578 360 ntBASIC19.95■□□□□ 0.78
PCDHGA9Q9Y5G4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA9Q9Y5G4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA9Q9Y5G4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA9Q9Y5G4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA9Q9Y5G4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA9Q9Y5G4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA9Q9Y5G4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA9Q9Y5G4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHGA9Q9Y5G4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA9Q9Y5G4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGA9Q9Y5G4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA9Q9Y5G4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA9Q9Y5G4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PCDHGA9Q9Y5G4 DUX4L16-201ENST00000555130 1264 ntBASIC19.94■□□□□ 0.78
PCDHGA9Q9Y5G4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGA9Q9Y5G4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA9Q9Y5G4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHGA9Q9Y5G4 AL050303.2-201ENST00000619798 666 ntBASIC19.94■□□□□ 0.78
PCDHGA9Q9Y5G4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHGA9Q9Y5G4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA9Q9Y5G4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.93■□□□□ 0.78
PCDHGA9Q9Y5G4 ANOS2P-203ENST00000472227 1816 ntBASIC19.93■□□□□ 0.78
PCDHGA9Q9Y5G4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms