Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 PQLC1-210ENST00000589452 704 ntTSL 527.16■■□□□ 1.942e-7■■■■□ 22.8
CSTF2TQ9H0L4 PQLC1-214ENST00000593030 764 ntTSL 524.19■■□□□ 1.462e-7■■■■□ 22.8
CSTF2TQ9H0L4 PQLC1-213ENST00000591964 856 ntTSL 323.96■■□□□ 1.432e-7■■■■□ 22.8
CSTF2TQ9H0L4 PQLC1-207ENST00000478144 409 ntTSL 311.07□□□□□ -0.642e-7■■■■□ 22.8
CSTF2TQ9H0L4 R3HDM1-215ENST00000483021 539 ntTSL 318.45■□□□□ 0.542e-12■■■■□ 22.8
CSTF2TQ9H0L4 R3HDM1-213ENST00000463230 2241 ntTSL 212.18□□□□□ -0.462e-12■■■■□ 22.8
CSTF2TQ9H0L4 R3HDM1-208ENST00000438014 582 ntTSL 58.59□□□□□ -1.032e-12■■■■□ 22.8
CSTF2TQ9H0L4 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.75□□□□□ -1.492e-12■■■■□ 22.8
CSTF2TQ9H0L4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.652e-12■■■■□ 22.8
CSTF2TQ9H0L4 R3HDM1-219ENST00000488035 502 ntTSL 34.54□□□□□ -1.682e-12■■■■□ 22.8
CSTF2TQ9H0L4 STXBP1-214ENST00000635950 2771 ntTSL 518.87■□□□□ 0.611e-6■■■■□ 22.8
CSTF2TQ9H0L4 STXBP1-210ENST00000627871 538 ntTSL 318.41■□□□□ 0.541e-6■■■■□ 22.8
CSTF2TQ9H0L4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.32■□□□□ 0.521e-6■■■■□ 22.8
CSTF2TQ9H0L4 STXBP1-213ENST00000630492 572 ntTSL 518.26■□□□□ 0.511e-6■■■■□ 22.8
CSTF2TQ9H0L4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.06■□□□□ 01e-6■■■■□ 22.8
CSTF2TQ9H0L4 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.371e-6■■■■□ 22.8
CSTF2TQ9H0L4 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.48□□□□□ -0.411e-6■■■■□ 22.8
CSTF2TQ9H0L4 STXBP1-217ENST00000637060 3825 ntTSL 512.13□□□□□ -0.471e-6■■■■□ 22.8
CSTF2TQ9H0L4 STXBP1-219ENST00000637464 4893 ntTSL 511.76□□□□□ -0.531e-6■■■■□ 22.8
CSTF2TQ9H0L4 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC11.7□□□□□ -0.541e-6■■■■□ 22.8
CSTF2TQ9H0L4 STXBP1-220ENST00000637521 2068 ntTSL 5 BASIC11.58□□□□□ -0.561e-6■■■■□ 22.8
CSTF2TQ9H0L4 STXBP1-218ENST00000637173 4193 ntTSL 5 BASIC10.95□□□□□ -0.661e-6■■■■□ 22.8
CSTF2TQ9H0L4 STXBP1-215ENST00000636509 3949 ntTSL 510.3□□□□□ -0.761e-6■■■■□ 22.8
CSTF2TQ9H0L4 STXBP1-209ENST00000626539 3840 ntTSL 5 BASIC9.4□□□□□ -0.91e-6■■■■□ 22.8
CSTF2TQ9H0L4 STXBP1-206ENST00000625363 550 ntTSL 48.33□□□□□ -1.081e-6■■■■□ 22.8
CSTF2TQ9H0L4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.38□□□□□ -0.112e-7■■■■□ 22.8
CSTF2TQ9H0L4 OGDH-203ENST00000439616 2962 ntTSL 2 BASIC11.33□□□□□ -0.62e-7■■■■□ 22.8
CSTF2TQ9H0L4 OGDH-205ENST00000444676 3309 ntTSL 5 BASIC10.23□□□□□ -0.772e-7■■■■□ 22.8
CSTF2TQ9H0L4 OGDH-206ENST00000447398 3474 ntTSL 5 BASIC9.58□□□□□ -0.882e-7■■■■□ 22.8
CSTF2TQ9H0L4 OGDH-207ENST00000449767 3479 ntAPPRIS ALT1 TSL 2 BASIC9.47□□□□□ -0.892e-7■■■■□ 22.8
CSTF2TQ9H0L4 OGDH-201ENST00000222673 4181 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.912e-7■■■■□ 22.8
CSTF2TQ9H0L4 OGDH-210ENST00000631326 4116 ntTSL 5 BASIC8.33□□□□□ -1.082e-7■■■■□ 22.8
CSTF2TQ9H0L4 OGDH-202ENST00000419661 789 ntTSL 57.99□□□□□ -1.132e-7■■■■□ 22.8
CSTF2TQ9H0L4 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.393e-7■■■■□ 22.8
CSTF2TQ9H0L4 PPAN-204ENST00000444703 757 ntTSL 324.48■■□□□ 1.513e-11■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-276ENST00000557676 633 ntTSL 224.13■■□□□ 1.451e-6■■■■□ 22.8
CSTF2TQ9H0L4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.15■■□□□ 1.32e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-245ENST00000555657 578 ntTSL 522.59■■□□□ 1.211e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-247ENST00000555733 924 ntTSL 521.92■■□□□ 1.11e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-254ENST00000556420 671 ntTSL 421.37■■□□□ 1.011e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZFAND1-213ENST00000520941 592 ntTSL 421.2■□□□□ 0.981e-6■■■■□ 22.8
CSTF2TQ9H0L4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.962e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-241ENST00000555142 609 ntTSL 520.9■□□□□ 0.941e-6■■■■□ 22.8
CSTF2TQ9H0L4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.93e-11■■■■□ 22.8
CSTF2TQ9H0L4 ZFAND1-220ENST00000523012 573 ntTSL 419.24■□□□□ 0.671e-6■■■■□ 22.8
CSTF2TQ9H0L4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.641e-7■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.51e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZFAND1-210ENST00000520076 570 ntTSL 418.14■□□□□ 0.491e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZFAND1-205ENST00000518419 567 ntTSL 418.1■□□□□ 0.491e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-235ENST00000554489 573 ntTSL 418.08■□□□□ 0.481e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-243ENST00000555384 775 ntTSL 518■□□□□ 0.471e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-239ENST00000554893 578 ntTSL 418■□□□□ 0.471e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.461e-6■■■■□ 22.8
CSTF2TQ9H0L4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.76■□□□□ 0.431e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-238ENST00000554833 571 ntTSL 417.63■□□□□ 0.411e-6■■■■□ 22.8
CSTF2TQ9H0L4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.415e-7■■■■□ 22.8
CSTF2TQ9H0L4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.391e-7■■■■□ 22.8
CSTF2TQ9H0L4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.391e-6■■■■□ 22.8
CSTF2TQ9H0L4 GMDS-201ENST00000380805 1743 ntTSL 217.33■□□□□ 0.361e-7■■■■□ 22.8
CSTF2TQ9H0L4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.331e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.291e-6■■■■□ 22.8
CSTF2TQ9H0L4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.251e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-252ENST00000556329 609 ntTSL 416.46■□□□□ 0.231e-6■■■■□ 22.8
CSTF2TQ9H0L4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.221e-6■■■■□ 22.8
CSTF2TQ9H0L4 ADCY7-209ENST00000566761 670 ntTSL 516.41■□□□□ 0.221e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.181e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-270ENST00000557318 515 ntTSL 216.14■□□□□ 0.171e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-266ENST00000557198 583 ntTSL 216.14■□□□□ 0.171e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-220ENST00000553784 943 ntTSL 216.03■□□□□ 0.161e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-268ENST00000557274 571 ntTSL 515.81■□□□□ 0.121e-6■■■■□ 22.8
CSTF2TQ9H0L4 TBCD-204ENST00000571316 1509 ntTSL 1 (best)15.77■□□□□ 0.111e-6■■■■□ 22.8
CSTF2TQ9H0L4 SNAP47-206ENST00000470038 739 ntTSL 315.4■□□□□ 0.061e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.041e-6■■■■□ 22.8
CSTF2TQ9H0L4 CEP120-208ENST00000513565 3973 ntTSL 1 (best)15.1■□□□□ 0.011e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-237ENST00000554561 632 ntTSL 214.92□□□□□ -0.021e-6■■■■□ 22.8
CSTF2TQ9H0L4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.051e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.67□□□□□ -0.061e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.64□□□□□ -0.071e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-271ENST00000557353 1919 ntTSL 214.48□□□□□ -0.091e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.11e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.131e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.131e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.161e-6■■■■□ 22.8
CSTF2TQ9H0L4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.181e-6■■■■□ 22.8
CSTF2TQ9H0L4 RPL8-214ENST00000534781 716 ntTSL 213.81□□□□□ -0.21e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-273ENST00000557616 579 ntTSL 513.74□□□□□ -0.211e-6■■■■□ 22.8
CSTF2TQ9H0L4 STK24-207ENST00000491878 547 ntTSL 413.71□□□□□ -0.219e-7■■■■□ 22.8
CSTF2TQ9H0L4 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.231e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-231ENST00000554415 554 ntTSL 413.17□□□□□ -0.31e-6■■■■□ 22.8
CSTF2TQ9H0L4 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.16□□□□□ -0.31e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-265ENST00000557182 559 ntTSL 413.14□□□□□ -0.311e-6■■■■□ 22.8
CSTF2TQ9H0L4 SNAP47-207ENST00000475930 792 ntTSL 313.06□□□□□ -0.321e-6■■■■□ 22.8
CSTF2TQ9H0L4 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.03□□□□□ -0.321e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.351e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-232ENST00000554419 583 ntTSL 312.61□□□□□ -0.391e-6■■■■□ 22.8
CSTF2TQ9H0L4 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.6□□□□□ -0.391e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-225ENST00000554094 595 ntTSL 512.58□□□□□ -0.41e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-259ENST00000556924 603 ntTSL 412.53□□□□□ -0.41e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-257ENST00000556688 583 ntTSL 512.43□□□□□ -0.421e-6■■■■□ 22.8
CSTF2TQ9H0L4 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.431e-6■■■■□ 22.8
Retrieved 100 of 19,151 protein–RNA pairs in 186.8 ms