Protein–RNA interactions for Protein: Q9EQ52

Vmn1r48, Vomeronasal type-1 receptor 48, mousemouse

Predictions only

Length 302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r48Q9EQ52 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vmn1r48Q9EQ52 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vmn1r48Q9EQ52 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vmn1r48Q9EQ52 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vmn1r48Q9EQ52 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vmn1r48Q9EQ52 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vmn1r48Q9EQ52 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vmn1r48Q9EQ52 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vmn1r48Q9EQ52 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vmn1r48Q9EQ52 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Vmn1r48Q9EQ52 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vmn1r48Q9EQ52 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Vmn1r48Q9EQ52 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vmn1r48Q9EQ52 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vmn1r48Q9EQ52 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vmn1r48Q9EQ52 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Vmn1r48Q9EQ52 Etf1-202ENSMUST00000180351 108 ntBASIC16.33■□□□□ 0.2
Vmn1r48Q9EQ52 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.33■□□□□ 0.2
Vmn1r48Q9EQ52 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vmn1r48Q9EQ52 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Vmn1r48Q9EQ52 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Vmn1r48Q9EQ52 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vmn1r48Q9EQ52 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.33■□□□□ 0.2
Vmn1r48Q9EQ52 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vmn1r48Q9EQ52 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vmn1r48Q9EQ52 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vmn1r48Q9EQ52 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vmn1r48Q9EQ52 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vmn1r48Q9EQ52 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Vmn1r48Q9EQ52 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vmn1r48Q9EQ52 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.32■□□□□ 0.2
Vmn1r48Q9EQ52 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vmn1r48Q9EQ52 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.32■□□□□ 0.2
Vmn1r48Q9EQ52 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vmn1r48Q9EQ52 Gm40881-201ENSMUST00000223397 166 ntBASIC16.32■□□□□ 0.2
Vmn1r48Q9EQ52 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vmn1r48Q9EQ52 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vmn1r48Q9EQ52 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vmn1r48Q9EQ52 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vmn1r48Q9EQ52 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vmn1r48Q9EQ52 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vmn1r48Q9EQ52 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vmn1r48Q9EQ52 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r48Q9EQ52 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r48Q9EQ52 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Vmn1r48Q9EQ52 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r48Q9EQ52 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Vmn1r48Q9EQ52 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r48Q9EQ52 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r48Q9EQ52 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r48Q9EQ52 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r48Q9EQ52 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.3■□□□□ 0.2
Vmn1r48Q9EQ52 Gm9870-201ENSMUST00000063874 645 ntBASIC16.3■□□□□ 0.2
Vmn1r48Q9EQ52 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r48Q9EQ52 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r48Q9EQ52 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r48Q9EQ52 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r48Q9EQ52 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r48Q9EQ52 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r48Q9EQ52 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.3■□□□□ 0.2
Vmn1r48Q9EQ52 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Vmn1r48Q9EQ52 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vmn1r48Q9EQ52 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vmn1r48Q9EQ52 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Vmn1r48Q9EQ52 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vmn1r48Q9EQ52 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.29■□□□□ 0.2
Vmn1r48Q9EQ52 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vmn1r48Q9EQ52 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
Vmn1r48Q9EQ52 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Vmn1r48Q9EQ52 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vmn1r48Q9EQ52 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vmn1r48Q9EQ52 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vmn1r48Q9EQ52 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vmn1r48Q9EQ52 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vmn1r48Q9EQ52 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.29■□□□□ 0.2
Vmn1r48Q9EQ52 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.29■□□□□ 0.2
Vmn1r48Q9EQ52 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.29■□□□□ 0.2
Vmn1r48Q9EQ52 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vmn1r48Q9EQ52 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms