Protein–RNA interactions for Protein: Q9BRT8

CBWD1, COBW domain-containing protein 1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1Q9BRT8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.4■■□□□ 1.34
CBWD1Q9BRT8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
CBWD1Q9BRT8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CBWD1Q9BRT8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.4■■□□□ 1.34
CBWD1Q9BRT8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CBWD1Q9BRT8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CBWD1Q9BRT8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CBWD1Q9BRT8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
CBWD1Q9BRT8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.39■■□□□ 1.34
CBWD1Q9BRT8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CBWD1Q9BRT8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CBWD1Q9BRT8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.39■■□□□ 1.33
CBWD1Q9BRT8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CBWD1Q9BRT8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CBWD1Q9BRT8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
CBWD1Q9BRT8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CBWD1Q9BRT8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.39■■□□□ 1.33
CBWD1Q9BRT8 AC010542.4-201ENST00000563151 1910 ntBASIC23.39■■□□□ 1.33
CBWD1Q9BRT8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CBWD1Q9BRT8 AC055733.4-201ENST00000638462 1354 ntBASIC23.39■■□□□ 1.33
CBWD1Q9BRT8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CBWD1Q9BRT8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.38■■□□□ 1.33
CBWD1Q9BRT8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.38■■□□□ 1.33
CBWD1Q9BRT8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
CBWD1Q9BRT8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CBWD1Q9BRT8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CBWD1Q9BRT8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
CBWD1Q9BRT8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CBWD1Q9BRT8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
CBWD1Q9BRT8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CBWD1Q9BRT8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.38■■□□□ 1.33
CBWD1Q9BRT8 YBX1P1-201ENST00000445822 960 ntBASIC23.38■■□□□ 1.33
CBWD1Q9BRT8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.38■■□□□ 1.33
CBWD1Q9BRT8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.38■■□□□ 1.33
CBWD1Q9BRT8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CBWD1Q9BRT8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CBWD1Q9BRT8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CBWD1Q9BRT8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CBWD1Q9BRT8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.37■■□□□ 1.33
CBWD1Q9BRT8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CBWD1Q9BRT8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.37■■□□□ 1.33
CBWD1Q9BRT8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CBWD1Q9BRT8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CBWD1Q9BRT8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CBWD1Q9BRT8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CBWD1Q9BRT8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.37■■□□□ 1.33
CBWD1Q9BRT8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CBWD1Q9BRT8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
CBWD1Q9BRT8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.37■■□□□ 1.33
CBWD1Q9BRT8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CBWD1Q9BRT8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CBWD1Q9BRT8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
CBWD1Q9BRT8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.36■■□□□ 1.33
CBWD1Q9BRT8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.36■■□□□ 1.33
CBWD1Q9BRT8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CBWD1Q9BRT8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CBWD1Q9BRT8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
CBWD1Q9BRT8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
CBWD1Q9BRT8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.35■■□□□ 1.33
CBWD1Q9BRT8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.35■■□□□ 1.33
CBWD1Q9BRT8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CBWD1Q9BRT8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CBWD1Q9BRT8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CBWD1Q9BRT8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CBWD1Q9BRT8 FBXW4P1-201ENST00000426721 2239 ntBASIC23.35■■□□□ 1.33
CBWD1Q9BRT8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.35■■□□□ 1.33
CBWD1Q9BRT8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CBWD1Q9BRT8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.35■■□□□ 1.33
CBWD1Q9BRT8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
CBWD1Q9BRT8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.35■■□□□ 1.33
CBWD1Q9BRT8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CBWD1Q9BRT8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
CBWD1Q9BRT8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.35■■□□□ 1.33
CBWD1Q9BRT8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CBWD1Q9BRT8 AC003102.1-202ENST00000563394 1796 ntBASIC23.35■■□□□ 1.33
CBWD1Q9BRT8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CBWD1Q9BRT8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CBWD1Q9BRT8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CBWD1Q9BRT8 AC123595.1-201ENST00000440769 1046 ntBASIC23.34■■□□□ 1.33
CBWD1Q9BRT8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CBWD1Q9BRT8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.34■■□□□ 1.33
CBWD1Q9BRT8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CBWD1Q9BRT8 LINC02228-203ENST00000641970 1355 ntBASIC23.34■■□□□ 1.33
CBWD1Q9BRT8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CBWD1Q9BRT8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CBWD1Q9BRT8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CBWD1Q9BRT8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CBWD1Q9BRT8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CBWD1Q9BRT8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CBWD1Q9BRT8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CBWD1Q9BRT8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CBWD1Q9BRT8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.33■■□□□ 1.33
CBWD1Q9BRT8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CBWD1Q9BRT8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CBWD1Q9BRT8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CBWD1Q9BRT8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.33■■□□□ 1.33
CBWD1Q9BRT8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
CBWD1Q9BRT8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
CBWD1Q9BRT8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CBWD1Q9BRT8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms