Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
ATL1Q8WXF7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATL1Q8WXF7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.88■□□□□ 0.93
ATL1Q8WXF7 AC142381.2-201ENST00000566120 298 ntBASIC20.88■□□□□ 0.93
ATL1Q8WXF7 SMUG1P1-201ENST00000590640 811 ntBASIC20.88■□□□□ 0.93
ATL1Q8WXF7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATL1Q8WXF7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATL1Q8WXF7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.87■□□□□ 0.93
ATL1Q8WXF7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
ATL1Q8WXF7 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.87■□□□□ 0.93
ATL1Q8WXF7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ATL1Q8WXF7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATL1Q8WXF7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATL1Q8WXF7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ATL1Q8WXF7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.87■□□□□ 0.93
ATL1Q8WXF7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATL1Q8WXF7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATL1Q8WXF7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATL1Q8WXF7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATL1Q8WXF7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.87■□□□□ 0.93
ATL1Q8WXF7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATL1Q8WXF7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATL1Q8WXF7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATL1Q8WXF7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATL1Q8WXF7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATL1Q8WXF7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.86■□□□□ 0.93
ATL1Q8WXF7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATL1Q8WXF7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATL1Q8WXF7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATL1Q8WXF7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATL1Q8WXF7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ATL1Q8WXF7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.86■□□□□ 0.93
ATL1Q8WXF7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.86■□□□□ 0.93
ATL1Q8WXF7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
ATL1Q8WXF7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATL1Q8WXF7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATL1Q8WXF7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.86■□□□□ 0.93
ATL1Q8WXF7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATL1Q8WXF7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.86■□□□□ 0.93
ATL1Q8WXF7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATL1Q8WXF7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.86■□□□□ 0.93
ATL1Q8WXF7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATL1Q8WXF7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATL1Q8WXF7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATL1Q8WXF7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATL1Q8WXF7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.85■□□□□ 0.93
ATL1Q8WXF7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATL1Q8WXF7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.85■□□□□ 0.93
ATL1Q8WXF7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATL1Q8WXF7 MIR572-201ENST00000384983 95 ntBASIC20.85■□□□□ 0.93
ATL1Q8WXF7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATL1Q8WXF7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.85■□□□□ 0.93
ATL1Q8WXF7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATL1Q8WXF7 AC005837.3-201ENST00000612163 286 ntBASIC20.85■□□□□ 0.93
ATL1Q8WXF7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATL1Q8WXF7 AC105233.4-201ENST00000642045 216 ntBASIC20.85■□□□□ 0.93
ATL1Q8WXF7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATL1Q8WXF7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATL1Q8WXF7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
ATL1Q8WXF7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ATL1Q8WXF7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATL1Q8WXF7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATL1Q8WXF7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATL1Q8WXF7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATL1Q8WXF7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.84■□□□□ 0.93
ATL1Q8WXF7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATL1Q8WXF7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATL1Q8WXF7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ATL1Q8WXF7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ATL1Q8WXF7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATL1Q8WXF7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.84■□□□□ 0.93
ATL1Q8WXF7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.83■□□□□ 0.93
ATL1Q8WXF7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.83■□□□□ 0.93
ATL1Q8WXF7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATL1Q8WXF7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
ATL1Q8WXF7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATL1Q8WXF7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATL1Q8WXF7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
ATL1Q8WXF7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.83■□□□□ 0.93
ATL1Q8WXF7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.83■□□□□ 0.93
ATL1Q8WXF7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.83■□□□□ 0.93
ATL1Q8WXF7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.83■□□□□ 0.93
ATL1Q8WXF7 FBXW4P1-201ENST00000426721 2239 ntBASIC20.83■□□□□ 0.93
ATL1Q8WXF7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATL1Q8WXF7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATL1Q8WXF7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATL1Q8WXF7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.83■□□□□ 0.92
ATL1Q8WXF7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATL1Q8WXF7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.82■□□□□ 0.92
ATL1Q8WXF7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
ATL1Q8WXF7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATL1Q8WXF7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATL1Q8WXF7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATL1Q8WXF7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ATL1Q8WXF7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.82■□□□□ 0.92
ATL1Q8WXF7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATL1Q8WXF7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.82■□□□□ 0.92
ATL1Q8WXF7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.82■□□□□ 0.92
ATL1Q8WXF7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.82■□□□□ 0.92
ATL1Q8WXF7 AC104564.3-201ENST00000582367 638 ntBASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms