Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.69■■□□□ 1.22
UBA3Q8TBC4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
UBA3Q8TBC4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
UBA3Q8TBC4 AC079834.2-201ENST00000609776 1949 ntBASIC22.69■■□□□ 1.22
UBA3Q8TBC4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
UBA3Q8TBC4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
UBA3Q8TBC4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.69■■□□□ 1.22
UBA3Q8TBC4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
UBA3Q8TBC4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
UBA3Q8TBC4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
UBA3Q8TBC4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.69■■□□□ 1.22
UBA3Q8TBC4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBA3Q8TBC4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
UBA3Q8TBC4 AC009237.3-201ENST00000393279 1427 ntBASIC22.68■■□□□ 1.22
UBA3Q8TBC4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
UBA3Q8TBC4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.68■■□□□ 1.22
UBA3Q8TBC4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.68■■□□□ 1.22
UBA3Q8TBC4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
UBA3Q8TBC4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.68■■□□□ 1.22
UBA3Q8TBC4 AC005224.4-201ENST00000583262 1652 ntBASIC22.68■■□□□ 1.22
UBA3Q8TBC4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBA3Q8TBC4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
UBA3Q8TBC4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
UBA3Q8TBC4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.67■■□□□ 1.22
UBA3Q8TBC4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
UBA3Q8TBC4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.67■■□□□ 1.22
UBA3Q8TBC4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
UBA3Q8TBC4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
UBA3Q8TBC4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.67■■□□□ 1.22
UBA3Q8TBC4 YBX1P1-201ENST00000445822 960 ntBASIC22.67■■□□□ 1.22
UBA3Q8TBC4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.67■■□□□ 1.22
UBA3Q8TBC4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
UBA3Q8TBC4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
UBA3Q8TBC4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
UBA3Q8TBC4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.67■■□□□ 1.22
UBA3Q8TBC4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.67■■□□□ 1.22
UBA3Q8TBC4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
UBA3Q8TBC4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.66■■□□□ 1.22
UBA3Q8TBC4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.66■■□□□ 1.22
UBA3Q8TBC4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.66■■□□□ 1.22
UBA3Q8TBC4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
UBA3Q8TBC4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
UBA3Q8TBC4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.66■■□□□ 1.22
UBA3Q8TBC4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
UBA3Q8TBC4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.66■■□□□ 1.22
UBA3Q8TBC4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
UBA3Q8TBC4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.66■■□□□ 1.22
UBA3Q8TBC4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.66■■□□□ 1.22
UBA3Q8TBC4 AP006587.3-201ENST00000525742 1516 ntBASIC22.66■■□□□ 1.22
UBA3Q8TBC4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
UBA3Q8TBC4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
UBA3Q8TBC4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
UBA3Q8TBC4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
UBA3Q8TBC4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
UBA3Q8TBC4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
UBA3Q8TBC4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
UBA3Q8TBC4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
UBA3Q8TBC4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
UBA3Q8TBC4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.65■■□□□ 1.22
UBA3Q8TBC4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
UBA3Q8TBC4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
UBA3Q8TBC4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
UBA3Q8TBC4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
UBA3Q8TBC4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
UBA3Q8TBC4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.64■■□□□ 1.22
UBA3Q8TBC4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
UBA3Q8TBC4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.64■■□□□ 1.22
UBA3Q8TBC4 MIR935-201ENST00000401179 91 ntBASIC22.64■■□□□ 1.21
UBA3Q8TBC4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.64■■□□□ 1.21
UBA3Q8TBC4 AC123595.1-201ENST00000440769 1046 ntBASIC22.64■■□□□ 1.21
UBA3Q8TBC4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
UBA3Q8TBC4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.64■■□□□ 1.21
UBA3Q8TBC4 AC010542.4-201ENST00000563151 1910 ntBASIC22.64■■□□□ 1.21
UBA3Q8TBC4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UBA3Q8TBC4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UBA3Q8TBC4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UBA3Q8TBC4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UBA3Q8TBC4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
UBA3Q8TBC4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
UBA3Q8TBC4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
UBA3Q8TBC4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UBA3Q8TBC4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.64■■□□□ 1.21
UBA3Q8TBC4 AC055733.4-201ENST00000638462 1354 ntBASIC22.63■■□□□ 1.21
UBA3Q8TBC4 LINC02228-203ENST00000641970 1355 ntBASIC22.63■■□□□ 1.21
UBA3Q8TBC4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.63■■□□□ 1.21
UBA3Q8TBC4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.63■■□□□ 1.21
UBA3Q8TBC4 LINC00565-201ENST00000562710 2331 ntBASIC22.63■■□□□ 1.21
UBA3Q8TBC4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBA3Q8TBC4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
UBA3Q8TBC4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBA3Q8TBC4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.63■■□□□ 1.21
UBA3Q8TBC4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.63■■□□□ 1.21
UBA3Q8TBC4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBA3Q8TBC4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBA3Q8TBC4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.63■■□□□ 1.21
UBA3Q8TBC4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBA3Q8TBC4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBA3Q8TBC4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.63■■□□□ 1.21
UBA3Q8TBC4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBA3Q8TBC4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms