Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
SMARCC2Q8TAQ2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMARCC2Q8TAQ2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SMARCC2Q8TAQ2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
SMARCC2Q8TAQ2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC25.11■■□□□ 1.61
SMARCC2Q8TAQ2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC25.11■■□□□ 1.61
SMARCC2Q8TAQ2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC25.11■■□□□ 1.61
SMARCC2Q8TAQ2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.11■■□□□ 1.61
SMARCC2Q8TAQ2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMARCC2Q8TAQ2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
SMARCC2Q8TAQ2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMARCC2Q8TAQ2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SMARCC2Q8TAQ2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMARCC2Q8TAQ2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
SMARCC2Q8TAQ2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC25.1■■□□□ 1.61
SMARCC2Q8TAQ2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMARCC2Q8TAQ2 AC026310.3-201ENST00000625186 2373 ntBASIC25.1■■□□□ 1.61
SMARCC2Q8TAQ2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC25.1■■□□□ 1.61
SMARCC2Q8TAQ2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCC2Q8TAQ2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC25.09■■□□□ 1.61
SMARCC2Q8TAQ2 AC244015.2-201ENST00000616358 1861 ntBASIC25.09■■□□□ 1.61
SMARCC2Q8TAQ2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCC2Q8TAQ2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC25.09■■□□□ 1.61
SMARCC2Q8TAQ2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCC2Q8TAQ2 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.09■■□□□ 1.61
SMARCC2Q8TAQ2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.09■■□□□ 1.61
SMARCC2Q8TAQ2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.09■■□□□ 1.61
SMARCC2Q8TAQ2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCC2Q8TAQ2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCC2Q8TAQ2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCC2Q8TAQ2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
SMARCC2Q8TAQ2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SMARCC2Q8TAQ2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SMARCC2Q8TAQ2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.08■■□□□ 1.61
SMARCC2Q8TAQ2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SMARCC2Q8TAQ2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SMARCC2Q8TAQ2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.08■■□□□ 1.61
SMARCC2Q8TAQ2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SMARCC2Q8TAQ2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SMARCC2Q8TAQ2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
SMARCC2Q8TAQ2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMARCC2Q8TAQ2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC25.07■■□□□ 1.6
SMARCC2Q8TAQ2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMARCC2Q8TAQ2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SMARCC2Q8TAQ2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SMARCC2Q8TAQ2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMARCC2Q8TAQ2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMARCC2Q8TAQ2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC25.07■■□□□ 1.6
SMARCC2Q8TAQ2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMARCC2Q8TAQ2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMARCC2Q8TAQ2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC25.07■■□□□ 1.6
SMARCC2Q8TAQ2 AC026271.2-201ENST00000428091 497 ntBASIC25.07■■□□□ 1.6
SMARCC2Q8TAQ2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC25.07■■□□□ 1.6
SMARCC2Q8TAQ2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMARCC2Q8TAQ2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMARCC2Q8TAQ2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMARCC2Q8TAQ2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMARCC2Q8TAQ2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SMARCC2Q8TAQ2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMARCC2Q8TAQ2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC25.07■■□□□ 1.6
SMARCC2Q8TAQ2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SMARCC2Q8TAQ2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.06■■□□□ 1.6
SMARCC2Q8TAQ2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SMARCC2Q8TAQ2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SMARCC2Q8TAQ2 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.06■■□□□ 1.6
SMARCC2Q8TAQ2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.06■■□□□ 1.6
SMARCC2Q8TAQ2 AL358852.1-201ENST00000623174 1268 ntBASIC25.06■■□□□ 1.6
SMARCC2Q8TAQ2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SMARCC2Q8TAQ2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
SMARCC2Q8TAQ2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.06■■□□□ 1.6
SMARCC2Q8TAQ2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
SMARCC2Q8TAQ2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SMARCC2Q8TAQ2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC25.05■■□□□ 1.6
SMARCC2Q8TAQ2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMARCC2Q8TAQ2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMARCC2Q8TAQ2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMARCC2Q8TAQ2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SMARCC2Q8TAQ2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
SMARCC2Q8TAQ2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMARCC2Q8TAQ2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.05■■□□□ 1.6
SMARCC2Q8TAQ2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC25.05■■□□□ 1.6
SMARCC2Q8TAQ2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.05■■□□□ 1.6
SMARCC2Q8TAQ2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.05■■□□□ 1.6
SMARCC2Q8TAQ2 AC012414.1-201ENST00000556676 535 ntBASIC25.05■■□□□ 1.6
SMARCC2Q8TAQ2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC25.05■■□□□ 1.6
SMARCC2Q8TAQ2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SMARCC2Q8TAQ2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMARCC2Q8TAQ2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC25.05■■□□□ 1.6
SMARCC2Q8TAQ2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SMARCC2Q8TAQ2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SMARCC2Q8TAQ2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SMARCC2Q8TAQ2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SMARCC2Q8TAQ2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SMARCC2Q8TAQ2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SMARCC2Q8TAQ2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC25.04■■□□□ 1.6
SMARCC2Q8TAQ2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SMARCC2Q8TAQ2 AL354811.1-201ENST00000610286 706 ntBASIC25.04■■□□□ 1.6
SMARCC2Q8TAQ2 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.04■■□□□ 1.6
SMARCC2Q8TAQ2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25.03■■□□□ 1.6
SMARCC2Q8TAQ2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms