Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.04■□□□□ 0.8
NUP43Q8NFH3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUP43Q8NFH3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUP43Q8NFH3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NUP43Q8NFH3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NUP43Q8NFH3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUP43Q8NFH3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUP43Q8NFH3 AF213884.3-201ENST00000563833 479 ntBASIC20.03■□□□□ 0.8
NUP43Q8NFH3 SMUG1P1-201ENST00000590640 811 ntBASIC20.03■□□□□ 0.8
NUP43Q8NFH3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.03■□□□□ 0.8
NUP43Q8NFH3 AL139246.5-201ENST00000606645 996 ntBASIC20.03■□□□□ 0.8
NUP43Q8NFH3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.03■□□□□ 0.8
NUP43Q8NFH3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NUP43Q8NFH3 TSPY26P-201ENST00000476365 1326 ntBASIC20.02■□□□□ 0.8
NUP43Q8NFH3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.02■□□□□ 0.8
NUP43Q8NFH3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUP43Q8NFH3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NUP43Q8NFH3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUP43Q8NFH3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
NUP43Q8NFH3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUP43Q8NFH3 AC007375.3-201ENST00000600936 2314 ntBASIC20.02■□□□□ 0.8
NUP43Q8NFH3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NUP43Q8NFH3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NUP43Q8NFH3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.02■□□□□ 0.8
NUP43Q8NFH3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NUP43Q8NFH3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
NUP43Q8NFH3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
NUP43Q8NFH3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NUP43Q8NFH3 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.02■□□□□ 0.8
NUP43Q8NFH3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NUP43Q8NFH3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUP43Q8NFH3 RASA4CP-201ENST00000424092 1398 ntBASIC20.02■□□□□ 0.8
NUP43Q8NFH3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NUP43Q8NFH3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.02■□□□□ 0.8
NUP43Q8NFH3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
NUP43Q8NFH3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
NUP43Q8NFH3 AC244015.2-201ENST00000616358 1861 ntBASIC20.02■□□□□ 0.8
NUP43Q8NFH3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NUP43Q8NFH3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NUP43Q8NFH3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.02■□□□□ 0.79
NUP43Q8NFH3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP43Q8NFH3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.01■□□□□ 0.79
NUP43Q8NFH3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP43Q8NFH3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
NUP43Q8NFH3 MIR939-201ENST00000401314 82 ntBASIC20.01■□□□□ 0.79
NUP43Q8NFH3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.01■□□□□ 0.79
NUP43Q8NFH3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.01■□□□□ 0.79
NUP43Q8NFH3 AL031432.3-201ENST00000607698 485 ntBASIC20.01■□□□□ 0.79
NUP43Q8NFH3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.01■□□□□ 0.79
NUP43Q8NFH3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP43Q8NFH3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.01■□□□□ 0.79
NUP43Q8NFH3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP43Q8NFH3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP43Q8NFH3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NUP43Q8NFH3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP43Q8NFH3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP43Q8NFH3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP43Q8NFH3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NUP43Q8NFH3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP43Q8NFH3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP43Q8NFH3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20■□□□□ 0.79
NUP43Q8NFH3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUP43Q8NFH3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
NUP43Q8NFH3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUP43Q8NFH3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20■□□□□ 0.79
NUP43Q8NFH3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20■□□□□ 0.79
NUP43Q8NFH3 AC104564.3-201ENST00000582367 638 ntBASIC20■□□□□ 0.79
NUP43Q8NFH3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUP43Q8NFH3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUP43Q8NFH3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20■□□□□ 0.79
NUP43Q8NFH3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
NUP43Q8NFH3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUP43Q8NFH3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20■□□□□ 0.79
NUP43Q8NFH3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
NUP43Q8NFH3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20■□□□□ 0.79
NUP43Q8NFH3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
NUP43Q8NFH3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NUP43Q8NFH3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
NUP43Q8NFH3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
NUP43Q8NFH3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NUP43Q8NFH3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NUP43Q8NFH3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.99■□□□□ 0.79
NUP43Q8NFH3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NUP43Q8NFH3 AC091305.1-201ENST00000479476 895 ntBASIC19.99■□□□□ 0.79
NUP43Q8NFH3 AL136967.2-201ENST00000623968 743 ntBASIC19.99■□□□□ 0.79
NUP43Q8NFH3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NUP43Q8NFH3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NUP43Q8NFH3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NUP43Q8NFH3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NUP43Q8NFH3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NUP43Q8NFH3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.98■□□□□ 0.79
NUP43Q8NFH3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NUP43Q8NFH3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.98■□□□□ 0.79
NUP43Q8NFH3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.98■□□□□ 0.79
NUP43Q8NFH3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.98■□□□□ 0.79
NUP43Q8NFH3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
NUP43Q8NFH3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
NUP43Q8NFH3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.98■□□□□ 0.79
NUP43Q8NFH3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NUP43Q8NFH3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms