Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.15■■□□□ 1.3
VPS52Q8N1B4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
VPS52Q8N1B4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
VPS52Q8N1B4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.14■■□□□ 1.3
VPS52Q8N1B4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.14■■□□□ 1.3
VPS52Q8N1B4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
VPS52Q8N1B4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.14■■□□□ 1.3
VPS52Q8N1B4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
VPS52Q8N1B4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
VPS52Q8N1B4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
VPS52Q8N1B4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.14■■□□□ 1.29
VPS52Q8N1B4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.14■■□□□ 1.29
VPS52Q8N1B4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
VPS52Q8N1B4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
VPS52Q8N1B4 KRT87P-202ENST00000534226 1464 ntBASIC23.14■■□□□ 1.29
VPS52Q8N1B4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.14■■□□□ 1.29
VPS52Q8N1B4 MFSD11-216ENST00000590393 1141 ntBASIC23.14■■□□□ 1.29
VPS52Q8N1B4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.14■■□□□ 1.29
VPS52Q8N1B4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
VPS52Q8N1B4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.14■■□□□ 1.29
VPS52Q8N1B4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.14■■□□□ 1.29
VPS52Q8N1B4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
VPS52Q8N1B4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.14■■□□□ 1.29
VPS52Q8N1B4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
VPS52Q8N1B4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
VPS52Q8N1B4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
VPS52Q8N1B4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
VPS52Q8N1B4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
VPS52Q8N1B4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
VPS52Q8N1B4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
VPS52Q8N1B4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.13■■□□□ 1.29
VPS52Q8N1B4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.13■■□□□ 1.29
VPS52Q8N1B4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
VPS52Q8N1B4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
VPS52Q8N1B4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.12■■□□□ 1.29
VPS52Q8N1B4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
VPS52Q8N1B4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
VPS52Q8N1B4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.12■■□□□ 1.29
VPS52Q8N1B4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
VPS52Q8N1B4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
VPS52Q8N1B4 GPX1P1-201ENST00000388829 606 ntBASIC23.12■■□□□ 1.29
VPS52Q8N1B4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.12■■□□□ 1.29
VPS52Q8N1B4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.12■■□□□ 1.29
VPS52Q8N1B4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
VPS52Q8N1B4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
VPS52Q8N1B4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
VPS52Q8N1B4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VPS52Q8N1B4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VPS52Q8N1B4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS52Q8N1B4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
VPS52Q8N1B4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS52Q8N1B4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS52Q8N1B4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS52Q8N1B4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
VPS52Q8N1B4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
VPS52Q8N1B4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.11■■□□□ 1.29
VPS52Q8N1B4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.11■■□□□ 1.29
VPS52Q8N1B4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS52Q8N1B4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
VPS52Q8N1B4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS52Q8N1B4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS52Q8N1B4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS52Q8N1B4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS52Q8N1B4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS52Q8N1B4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
VPS52Q8N1B4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.1■■□□□ 1.29
VPS52Q8N1B4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
VPS52Q8N1B4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
VPS52Q8N1B4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
VPS52Q8N1B4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
VPS52Q8N1B4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.1■■□□□ 1.29
VPS52Q8N1B4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
VPS52Q8N1B4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.1■■□□□ 1.29
VPS52Q8N1B4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
VPS52Q8N1B4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.1■■□□□ 1.29
VPS52Q8N1B4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
VPS52Q8N1B4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
VPS52Q8N1B4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
VPS52Q8N1B4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
VPS52Q8N1B4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
VPS52Q8N1B4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
VPS52Q8N1B4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
VPS52Q8N1B4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
VPS52Q8N1B4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
VPS52Q8N1B4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.09■■□□□ 1.29
VPS52Q8N1B4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
VPS52Q8N1B4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.09■■□□□ 1.29
VPS52Q8N1B4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.09■■□□□ 1.29
VPS52Q8N1B4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
VPS52Q8N1B4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.09■■□□□ 1.29
VPS52Q8N1B4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
VPS52Q8N1B4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.09■■□□□ 1.29
VPS52Q8N1B4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
VPS52Q8N1B4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
VPS52Q8N1B4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
VPS52Q8N1B4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
VPS52Q8N1B4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
VPS52Q8N1B4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
VPS52Q8N1B4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
VPS52Q8N1B4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms