Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE9Q8IYJ1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE9Q8IYJ1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE9Q8IYJ1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE9Q8IYJ1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.15■□□□□ 0.98
CPNE9Q8IYJ1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE9Q8IYJ1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE9Q8IYJ1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE9Q8IYJ1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE9Q8IYJ1 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.15■□□□□ 0.98
CPNE9Q8IYJ1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE9Q8IYJ1 AF213884.3-201ENST00000563833 479 ntBASIC21.15■□□□□ 0.98
CPNE9Q8IYJ1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.15■□□□□ 0.98
CPNE9Q8IYJ1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CPNE9Q8IYJ1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.15■□□□□ 0.98
CPNE9Q8IYJ1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE9Q8IYJ1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
CPNE9Q8IYJ1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE9Q8IYJ1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.14■□□□□ 0.98
CPNE9Q8IYJ1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CPNE9Q8IYJ1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CPNE9Q8IYJ1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE9Q8IYJ1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE9Q8IYJ1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.14■□□□□ 0.97
CPNE9Q8IYJ1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE9Q8IYJ1 AL031432.3-201ENST00000607698 485 ntBASIC21.14■□□□□ 0.97
CPNE9Q8IYJ1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE9Q8IYJ1 AL355001.2-201ENST00000620617 1191 ntBASIC21.14■□□□□ 0.97
CPNE9Q8IYJ1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
CPNE9Q8IYJ1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE9Q8IYJ1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE9Q8IYJ1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE9Q8IYJ1 AP004607.7-201ENST00000527152 1677 ntBASIC21.14■□□□□ 0.97
CPNE9Q8IYJ1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE9Q8IYJ1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE9Q8IYJ1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 AL139246.5-201ENST00000606645 996 ntBASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CPNE9Q8IYJ1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.12■□□□□ 0.97
CPNE9Q8IYJ1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE9Q8IYJ1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE9Q8IYJ1 AL137060.1-201ENST00000618151 2648 ntBASIC21.12■□□□□ 0.97
CPNE9Q8IYJ1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE9Q8IYJ1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.12■□□□□ 0.97
CPNE9Q8IYJ1 TSPY26P-201ENST00000476365 1326 ntBASIC21.12■□□□□ 0.97
CPNE9Q8IYJ1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
CPNE9Q8IYJ1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE9Q8IYJ1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE9Q8IYJ1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE9Q8IYJ1 MIR939-201ENST00000401314 82 ntBASIC21.12■□□□□ 0.97
CPNE9Q8IYJ1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.12■□□□□ 0.97
CPNE9Q8IYJ1 SMUG1P1-201ENST00000590640 811 ntBASIC21.12■□□□□ 0.97
CPNE9Q8IYJ1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE9Q8IYJ1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE9Q8IYJ1 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.12■□□□□ 0.97
CPNE9Q8IYJ1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE9Q8IYJ1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE9Q8IYJ1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE9Q8IYJ1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.11■□□□□ 0.97
CPNE9Q8IYJ1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.11■□□□□ 0.97
CPNE9Q8IYJ1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.11■□□□□ 0.97
CPNE9Q8IYJ1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CPNE9Q8IYJ1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.11■□□□□ 0.97
CPNE9Q8IYJ1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE9Q8IYJ1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE9Q8IYJ1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE9Q8IYJ1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE9Q8IYJ1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE9Q8IYJ1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE9Q8IYJ1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE9Q8IYJ1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE9Q8IYJ1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE9Q8IYJ1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.1■□□□□ 0.97
CPNE9Q8IYJ1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE9Q8IYJ1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.1■□□□□ 0.97
CPNE9Q8IYJ1 AL034346.1-201ENST00000568244 1277 ntBASIC21.1■□□□□ 0.97
CPNE9Q8IYJ1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE9Q8IYJ1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.1■□□□□ 0.97
CPNE9Q8IYJ1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms