Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C11orf88Q6PI97 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
C11orf88Q6PI97 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
C11orf88Q6PI97 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
C11orf88Q6PI97 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
C11orf88Q6PI97 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 MIR6724-1-201ENST00000616420 92 ntBASIC18.51■□□□□ 0.55
C11orf88Q6PI97 MIR6724-2-201ENST00000616483 92 ntBASIC18.51■□□□□ 0.55
C11orf88Q6PI97 MIR6724-4-201ENST00000617390 92 ntBASIC18.51■□□□□ 0.55
C11orf88Q6PI97 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 MIR6724-3-201ENST00000622482 92 ntBASIC18.51■□□□□ 0.55
C11orf88Q6PI97 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf88Q6PI97 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf88Q6PI97 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.5■□□□□ 0.55
C11orf88Q6PI97 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf88Q6PI97 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf88Q6PI97 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
C11orf88Q6PI97 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf88Q6PI97 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf88Q6PI97 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf88Q6PI97 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.5■□□□□ 0.55
C11orf88Q6PI97 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.5■□□□□ 0.55
C11orf88Q6PI97 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.5■□□□□ 0.55
C11orf88Q6PI97 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.5■□□□□ 0.55
C11orf88Q6PI97 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.5■□□□□ 0.55
C11orf88Q6PI97 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf88Q6PI97 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf88Q6PI97 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf88Q6PI97 AF131216.4-201ENST00000638924 1588 ntBASIC18.5■□□□□ 0.55
C11orf88Q6PI97 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf88Q6PI97 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
C11orf88Q6PI97 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
C11orf88Q6PI97 RNF165-205ENST00000588679 2904 ntBASIC18.5■□□□□ 0.55
C11orf88Q6PI97 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf88Q6PI97 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf88Q6PI97 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf88Q6PI97 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.49■□□□□ 0.55
C11orf88Q6PI97 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.49■□□□□ 0.55
C11orf88Q6PI97 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.49■□□□□ 0.55
C11orf88Q6PI97 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf88Q6PI97 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf88Q6PI97 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf88Q6PI97 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf88Q6PI97 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
C11orf88Q6PI97 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf88Q6PI97 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf88Q6PI97 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf88Q6PI97 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.49■□□□□ 0.55
C11orf88Q6PI97 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf88Q6PI97 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
C11orf88Q6PI97 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
C11orf88Q6PI97 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
C11orf88Q6PI97 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.48■□□□□ 0.55
C11orf88Q6PI97 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C11orf88Q6PI97 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.48■□□□□ 0.55
C11orf88Q6PI97 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C11orf88Q6PI97 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C11orf88Q6PI97 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.48■□□□□ 0.55
C11orf88Q6PI97 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C11orf88Q6PI97 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.48■□□□□ 0.55
C11orf88Q6PI97 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
C11orf88Q6PI97 AL356740.2-201ENST00000601559 647 ntBASIC18.48■□□□□ 0.55
C11orf88Q6PI97 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.48■□□□□ 0.55
C11orf88Q6PI97 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C11orf88Q6PI97 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
C11orf88Q6PI97 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.48■□□□□ 0.55
C11orf88Q6PI97 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C11orf88Q6PI97 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
C11orf88Q6PI97 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
C11orf88Q6PI97 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.47■□□□□ 0.55
C11orf88Q6PI97 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.47■□□□□ 0.55
C11orf88Q6PI97 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C11orf88Q6PI97 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.47■□□□□ 0.55
C11orf88Q6PI97 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C11orf88Q6PI97 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C11orf88Q6PI97 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.47■□□□□ 0.55
C11orf88Q6PI97 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
C11orf88Q6PI97 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.47■□□□□ 0.55
C11orf88Q6PI97 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms