Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CTSL3PQ5NE16 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTSL3PQ5NE16 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTSL3PQ5NE16 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTSL3PQ5NE16 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTSL3PQ5NE16 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CTSL3PQ5NE16 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTSL3PQ5NE16 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.16■□□□□ 0.98
CTSL3PQ5NE16 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.15■□□□□ 0.98
CTSL3PQ5NE16 AP006587.3-201ENST00000525742 1516 ntBASIC21.15■□□□□ 0.98
CTSL3PQ5NE16 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSL3PQ5NE16 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.15■□□□□ 0.98
CTSL3PQ5NE16 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.15■□□□□ 0.98
CTSL3PQ5NE16 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.15■□□□□ 0.98
CTSL3PQ5NE16 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.15■□□□□ 0.98
CTSL3PQ5NE16 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTSL3PQ5NE16 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CTSL3PQ5NE16 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.15■□□□□ 0.98
CTSL3PQ5NE16 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTSL3PQ5NE16 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSL3PQ5NE16 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
CTSL3PQ5NE16 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTSL3PQ5NE16 AC244015.2-201ENST00000616358 1861 ntBASIC21.14■□□□□ 0.97
CTSL3PQ5NE16 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTSL3PQ5NE16 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.14■□□□□ 0.97
CTSL3PQ5NE16 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTSL3PQ5NE16 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTSL3PQ5NE16 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CTSL3PQ5NE16 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTSL3PQ5NE16 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CTSL3PQ5NE16 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSL3PQ5NE16 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.13■□□□□ 0.97
CTSL3PQ5NE16 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.13■□□□□ 0.97
CTSL3PQ5NE16 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSL3PQ5NE16 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSL3PQ5NE16 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.13■□□□□ 0.97
CTSL3PQ5NE16 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.13■□□□□ 0.97
CTSL3PQ5NE16 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSL3PQ5NE16 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSL3PQ5NE16 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSL3PQ5NE16 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSL3PQ5NE16 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.13■□□□□ 0.97
CTSL3PQ5NE16 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CTSL3PQ5NE16 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTSL3PQ5NE16 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTSL3PQ5NE16 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.12■□□□□ 0.97
CTSL3PQ5NE16 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTSL3PQ5NE16 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSL3PQ5NE16 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CTSL3PQ5NE16 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSL3PQ5NE16 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTSL3PQ5NE16 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.12■□□□□ 0.97
CTSL3PQ5NE16 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSL3PQ5NE16 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSL3PQ5NE16 AC003102.1-202ENST00000563394 1796 ntBASIC21.12■□□□□ 0.97
CTSL3PQ5NE16 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTSL3PQ5NE16 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSL3PQ5NE16 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSL3PQ5NE16 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSL3PQ5NE16 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSL3PQ5NE16 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSL3PQ5NE16 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.11■□□□□ 0.97
CTSL3PQ5NE16 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSL3PQ5NE16 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
CTSL3PQ5NE16 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSL3PQ5NE16 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.11■□□□□ 0.97
CTSL3PQ5NE16 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSL3PQ5NE16 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.1■□□□□ 0.97
CTSL3PQ5NE16 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSL3PQ5NE16 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CTSL3PQ5NE16 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CTSL3PQ5NE16 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.1■□□□□ 0.97
CTSL3PQ5NE16 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTSL3PQ5NE16 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.1■□□□□ 0.97
CTSL3PQ5NE16 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.1■□□□□ 0.97
CTSL3PQ5NE16 AC105265.2-201ENST00000467189 838 ntBASIC21.1■□□□□ 0.97
CTSL3PQ5NE16 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.1■□□□□ 0.97
CTSL3PQ5NE16 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CTSL3PQ5NE16 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.1■□□□□ 0.97
CTSL3PQ5NE16 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.1■□□□□ 0.97
CTSL3PQ5NE16 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.1■□□□□ 0.97
CTSL3PQ5NE16 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.1■□□□□ 0.97
CTSL3PQ5NE16 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTSL3PQ5NE16 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.1■□□□□ 0.97
CTSL3PQ5NE16 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSL3PQ5NE16 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CTSL3PQ5NE16 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSL3PQ5NE16 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.09■□□□□ 0.97
CTSL3PQ5NE16 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSL3PQ5NE16 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.09■□□□□ 0.97
CTSL3PQ5NE16 AC012414.1-201ENST00000556676 535 ntBASIC21.09■□□□□ 0.97
CTSL3PQ5NE16 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.09■□□□□ 0.97
CTSL3PQ5NE16 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSL3PQ5NE16 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.09■□□□□ 0.97
CTSL3PQ5NE16 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.09■□□□□ 0.97
CTSL3PQ5NE16 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
CTSL3PQ5NE16 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CTSL3PQ5NE16 BX005040.4-201ENST00000637145 1518 ntBASIC21.09■□□□□ 0.97
CTSL3PQ5NE16 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSL3PQ5NE16 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms