Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 PEX10YDR265W 1014 nt2.94□□□□□ -1.94
RRP40Q08285 YER165C-AYER165C-A 357 nt2.94□□□□□ -1.94
RRP40Q08285 MRPS35YGR165W 1038 nt2.94□□□□□ -1.94
RRP40Q08285 YJR111CYJR111C 852 nt2.94□□□□□ -1.94
RRP40Q08285 AHP1YLR109W 531 nt2.94□□□□□ -1.94
RRP40Q08285 SPC24YMR117C 642 nt2.94□□□□□ -1.94
RRP40Q08285 ERG2YMR202W 669 nt2.94□□□□□ -1.94
RRP40Q08285 MDJ2YNL328C 441 nt2.94□□□□□ -1.94
RRP40Q08285 CPR8YNR028W 927 nt2.94□□□□□ -1.94
RRP40Q08285 IZH2YOL002C 954 nt2.94□□□□□ -1.94
RRP40Q08285 RFM1YOR279C 933 nt2.94□□□□□ -1.94
RRP40Q08285 UAF30YOR295W 687 nt2.94□□□□□ -1.94
RRP40Q08285 RPS11BYBR048W 471 nt2.94□□□□□ -1.94
RRP40Q08285 USV1YPL230W 1176 nt2.94□□□□□ -1.94
RRP40Q08285 CMD1YBR109C 444 nt2.94□□□□□ -1.94
RRP40Q08285 MRPL37YBR268W 318 nt2.94□□□□□ -1.94
RRP40Q08285 UBP5YER144C 2418 nt2.94□□□□□ -1.94
RRP40Q08285 ACK1YDL203C 1872 nt2.94□□□□□ -1.94
RRP40Q08285 MIG1YGL035C 1515 nt2.93□□□□□ -1.94
RRP40Q08285 YPS6YIR039C 1614 nt2.93□□□□□ -1.94
RRP40Q08285 YDR089WYDR089W 2610 nt2.93□□□□□ -1.94
RRP40Q08285 MAL12YGR292W 1755 nt2.93□□□□□ -1.94
RRP40Q08285 MAL32YBR299W 1755 nt2.93□□□□□ -1.94
RRP40Q08285 HAP4YKL109W 1665 nt2.93□□□□□ -1.94
RRP40Q08285 YCL076WYCL076W 744 nt2.93□□□□□ -1.94
RRP40Q08285 tC(GCA)BtC(GCA)B 72 nt2.93□□□□□ -1.94
RRP40Q08285 tC(GCA)GtC(GCA)G 72 nt2.93□□□□□ -1.94
RRP40Q08285 tC(GCA)P1tC(GCA)P1 72 nt2.93□□□□□ -1.94
RRP40Q08285 tC(GCA)P2tC(GCA)P2 72 nt2.93□□□□□ -1.94
RRP40Q08285 NSE3YDR288W 912 nt2.93□□□□□ -1.94
RRP40Q08285 YDR442WYDR442W 393 nt2.93□□□□□ -1.94
RRP40Q08285 DUO1YGL061C 744 nt2.93□□□□□ -1.94
RRP40Q08285 MRM2YGL136C 963 nt2.93□□□□□ -1.94
RRP40Q08285 CIR1YGR207C 786 nt2.93□□□□□ -1.94
RRP40Q08285 tQ(UUG)BtQ(UUG)B 72 nt2.93□□□□□ -1.94
RRP40Q08285 ERP1YAR002C-A 660 nt2.93□□□□□ -1.94
RRP40Q08285 RAD10YML095C 633 nt2.93□□□□□ -1.94
RRP40Q08285 RPL13BYMR142C 600 nt2.93□□□□□ -1.94
RRP40Q08285 YBL094CYBL094C 333 nt2.93□□□□□ -1.94
RRP40Q08285 CPA2YJR109C 3357 nt2.92□□□□□ -1.94
RRP40Q08285 BUD4YJR092W 4344 nt2.92□□□□□ -1.94
RRP40Q08285 OAF3YKR064W 2592 nt2.92□□□□□ -1.94
RRP40Q08285 CAF130YGR134W 3369 nt2.92□□□□□ -1.94
RRP40Q08285 RPS29BYDL061C 171 nt2.92□□□□□ -1.94
RRP40Q08285 FRQ1YDR373W 573 nt2.92□□□□□ -1.94
RRP40Q08285 SCL1YGL011C 759 nt2.92□□□□□ -1.94
RRP40Q08285 DOG2YHR043C 741 nt2.92□□□□□ -1.94
RRP40Q08285 RPS21BYJL136C 264 nt2.92□□□□□ -1.94
RRP40Q08285 YLR154C-HYLR154C-H 132 nt2.92□□□□□ -1.94
RRP40Q08285 YLR156C-AYLR156C-A 132 nt2.92□□□□□ -1.94
RRP40Q08285 YLR157C-CYLR157C-C 132 nt2.92□□□□□ -1.94
RRP40Q08285 YLR159C-AYLR159C-A 132 nt2.92□□□□□ -1.94
RRP40Q08285 BUR2YLR226W 1188 nt2.92□□□□□ -1.94
RRP40Q08285 TAF4YMR005W 1167 nt2.92□□□□□ -1.94
RRP40Q08285 MED11YMR112C 396 nt2.92□□□□□ -1.94
RRP40Q08285 STE23YLR389C 3084 nt2.92□□□□□ -1.94
RRP40Q08285 STP2YHR006W 1626 nt2.92□□□□□ -1.94
RRP40Q08285 YPR148CYPR148C 1308 nt2.92□□□□□ -1.94
RRP40Q08285 SDS23YGL056C 1584 nt2.91□□□□□ -1.94
RRP40Q08285 CHO2YGR157W 2610 nt2.91□□□□□ -1.94
RRP40Q08285 SNQ2YDR011W 4506 nt2.91□□□□□ -1.94
RRP40Q08285 YKR015CYKR015C 1707 nt2.91□□□□□ -1.94
RRP40Q08285 BCS1YDR375C 1371 nt2.91□□□□□ -1.94
RRP40Q08285 CAB2YIL083C 1098 nt2.91□□□□□ -1.94
RRP40Q08285 YBL039W-BYBL039W-B 180 nt2.91□□□□□ -1.94
RRP40Q08285 YMR316C-AYMR316C-A 312 nt2.91□□□□□ -1.94
RRP40Q08285 YOR082CYOR082C 342 nt2.91□□□□□ -1.94
RRP40Q08285 PNT1YOR266W 1272 nt2.91□□□□□ -1.94
RRP40Q08285 YSP2YDR326C 4317 nt2.91□□□□□ -1.94
RRP40Q08285 TFB2YPL122C 1542 nt2.91□□□□□ -1.94
RRP40Q08285 TOP1YOL006C 2310 nt2.91□□□□□ -1.94
RRP40Q08285 SPO14YKR031C 5052 nt2.9□□□□□ -1.94
RRP40Q08285 YGR026WYGR026W 837 nt2.9□□□□□ -1.95
RRP40Q08285 PHD1YKL043W 1101 nt2.9□□□□□ -1.95
RRP40Q08285 APC9YLR102C 798 nt2.9□□□□□ -1.95
RRP40Q08285 COQ9YLR201C 783 nt2.9□□□□□ -1.95
RRP40Q08285 YMR141CYMR141C 309 nt2.9□□□□□ -1.95
RRP40Q08285 snR63snR63 255 nt2.89□□□□□ -1.95
RRP40Q08285 DYN2YDR424C 279 nt2.89□□□□□ -1.95
RRP40Q08285 STP1YDR463W 1560 nt2.89□□□□□ -1.95
RRP40Q08285 EPL1YFL024C 2499 nt2.89□□□□□ -1.95
RRP40Q08285 SCM4YGR049W 564 nt2.89□□□□□ -1.95
RRP40Q08285 YPT35YHR105W 645 nt2.89□□□□□ -1.95
RRP40Q08285 IRC18YJL037W 675 nt2.89□□□□□ -1.95
RRP40Q08285 RPC37YKR025W 849 nt2.89□□□□□ -1.95
RRP40Q08285 YLR444CYLR444C 303 nt2.89□□□□□ -1.95
RRP40Q08285 SEC59YMR013C 1560 nt2.89□□□□□ -1.95
RRP40Q08285 YMR294W-AYMR294W-A 360 nt2.89□□□□□ -1.95
RRP40Q08285 OCA2YNL056W 594 nt2.89□□□□□ -1.95
RRP40Q08285 YPR136CYPR136C 513 nt2.89□□□□□ -1.95
RRP40Q08285 TIM12YBR091C 330 nt2.89□□□□□ -1.95
RRP40Q08285 RCY1YJL204C 2523 nt2.89□□□□□ -1.95
RRP40Q08285 LCB4YOR171C 1875 nt2.88□□□□□ -1.95
RRP40Q08285 CDH1YGL003C 1701 nt2.88□□□□□ -1.95
RRP40Q08285 TRE2YOR256C 2430 nt2.88□□□□□ -1.95
RRP40Q08285 TLG1YDR468C 675 nt2.88□□□□□ -1.95
RRP40Q08285 YGR107WYGR107W 450 nt2.88□□□□□ -1.95
RRP40Q08285 MRPL49YJL096W 486 nt2.88□□□□□ -1.95
RRP40Q08285 YLR012CYLR012C 300 nt2.88□□□□□ -1.95
RRP40Q08285 MRPS17YMR188C 714 nt2.88□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 20 ms