Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 YGL109WYGL109W 324 nt4.45□□□□□ -1.7
SSL2Q00578 YGL242CYGL242C 546 nt4.45□□□□□ -1.7
SSL2Q00578 COS12YGL263W 1143 nt4.45□□□□□ -1.7
SSL2Q00578 SCM4YGR049W 564 nt4.45□□□□□ -1.7
SSL2Q00578 PET130YJL023C 1044 nt4.45□□□□□ -1.7
SSL2Q00578 YLR364C-AYLR364C-A 123 nt4.45□□□□□ -1.7
SSL2Q00578 SNO2YNL334C 669 nt4.45□□□□□ -1.7
SSL2Q00578 SPR2YOR214C 711 nt4.45□□□□□ -1.7
SSL2Q00578 MSK1YNL073W 1731 nt4.45□□□□□ -1.7
SSL2Q00578 FAR8YMR029C 1572 nt4.44□□□□□ -1.7
SSL2Q00578 YCL075WYCL075W 441 nt4.44□□□□□ -1.7
SSL2Q00578 YCR085WYCR085W 354 nt4.44□□□□□ -1.7
SSL2Q00578 YDR118W-AYDR118W-A 117 nt4.44□□□□□ -1.7
SSL2Q00578 YDR246W-AYDR246W-A 201 nt4.44□□□□□ -1.7
SSL2Q00578 MST27YGL051W 705 nt4.44□□□□□ -1.7
SSL2Q00578 CAP2YIL034C 864 nt4.44□□□□□ -1.7
SSL2Q00578 CCE1YKL011C 1062 nt4.44□□□□□ -1.7
SSL2Q00578 MST28YAR033W 705 nt4.44□□□□□ -1.7
SSL2Q00578 DCS1YLR270W 1053 nt4.44□□□□□ -1.7
SSL2Q00578 IRC21YMR073C 606 nt4.44□□□□□ -1.7
SSL2Q00578 EOS1YNL080C 1101 nt4.44□□□□□ -1.7
SSL2Q00578 POP3YNL282W 588 nt4.44□□□□□ -1.7
SSL2Q00578 HSH49YOR319W 642 nt4.44□□□□□ -1.7
SSL2Q00578 OM14YBR230C 405 nt4.44□□□□□ -1.7
SSL2Q00578 YOL075CYOL075C 3885 nt4.43□□□□□ -1.7
SSL2Q00578 YCL068CYCL068C 783 nt4.43□□□□□ -1.7
SSL2Q00578 WBP1YEL002C 1293 nt4.43□□□□□ -1.7
SSL2Q00578 MAG1YER142C 891 nt4.43□□□□□ -1.7
SSL2Q00578 YFL051CYFL051C 483 nt4.43□□□□□ -1.7
SSL2Q00578 YGR109W-AYGR109W-A 873 nt4.43□□□□□ -1.7
SSL2Q00578 YGR126WYGR126W 693 nt4.43□□□□□ -1.7
SSL2Q00578 GVP36YIL041W 981 nt4.43□□□□□ -1.7
SSL2Q00578 YIL082WYIL082W 873 nt4.43□□□□□ -1.7
SSL2Q00578 RNR2YJL026W 1200 nt4.43□□□□□ -1.7
SSL2Q00578 YJL028WYJL028W 336 nt4.43□□□□□ -1.7
SSL2Q00578 AIM22YJL046W 1230 nt4.43□□□□□ -1.7
SSL2Q00578 CSI2YOL007C 1026 nt4.43□□□□□ -1.7
SSL2Q00578 FLC1YPL221W 2382 nt4.43□□□□□ -1.7
SSL2Q00578 FAA1YOR317W 2103 nt4.43□□□□□ -1.7
SSL2Q00578 SEC2YNL272C 2280 nt4.43□□□□□ -1.7
SSL2Q00578 CHL1YPL008W 2586 nt4.42□□□□□ -1.7
SSL2Q00578 FOX2YKR009C 2703 nt4.42□□□□□ -1.7
SSL2Q00578 ERP3YDL018C 678 nt4.42□□□□□ -1.7
SSL2Q00578 NUG1YER006W 1563 nt4.42□□□□□ -1.7
SSL2Q00578 YER158W-AYER158W-A 216 nt4.42□□□□□ -1.7
SSL2Q00578 TAN1YGL232W 870 nt4.42□□□□□ -1.7
SSL2Q00578 TDA3YHR009C 1572 nt4.42□□□□□ -1.7
SSL2Q00578 RPF1YHR088W 888 nt4.42□□□□□ -1.7
SSL2Q00578 SFT1YKL006C-A 294 nt4.42□□□□□ -1.7
SSL2Q00578 ECM13YBL043W 774 nt4.42□□□□□ -1.7
SSL2Q00578 SSO2YMR183C 888 nt4.42□□□□□ -1.7
SSL2Q00578 NIS1YNL078W 1224 nt4.42□□□□□ -1.7
SSL2Q00578 MEI5YPL121C 669 nt4.42□□□□□ -1.7
SSL2Q00578 YPR078CYPR078C 1119 nt4.42□□□□□ -1.7
SSL2Q00578 YCL022CYCL022C 516 nt4.42□□□□□ -1.7
SSL2Q00578 BUD6YLR319C 2367 nt4.42□□□□□ -1.7
SSL2Q00578 YDR131CYDR131C 1671 nt4.41□□□□□ -1.7
SSL2Q00578 PHO5YBR093C 1404 nt4.41□□□□□ -1.7
SSL2Q00578 YCR075W-AYCR075W-A 228 nt4.41□□□□□ -1.7
SSL2Q00578 SLX8YER116C 825 nt4.41□□□□□ -1.7
SSL2Q00578 YGL006W-AYGL006W-A 111 nt4.41□□□□□ -1.7
SSL2Q00578 YGR042WYGR042W 816 nt4.41□□□□□ -1.7
SSL2Q00578 LIN1YHR156C 1023 nt4.41□□□□□ -1.7
SSL2Q00578 THP2YHR167W 786 nt4.41□□□□□ -1.7
SSL2Q00578 HIS5YIL116W 1158 nt4.41□□□□□ -1.7
SSL2Q00578 YJR141WYJR141W 1044 nt4.41□□□□□ -1.7
SSL2Q00578 YLR264C-AYLR264C-A 117 nt4.41□□□□□ -1.7
SSL2Q00578 RPS30AYLR287C-A 192 nt4.41□□□□□ -1.7
SSL2Q00578 SAS2YMR127C 1017 nt4.41□□□□□ -1.7
SSL2Q00578 AIM36YMR157C 768 nt4.41□□□□□ -1.7
SSL2Q00578 PEX15YOL044W 1152 nt4.41□□□□□ -1.7
SSL2Q00578 INA17YPL099C 549 nt4.41□□□□□ -1.7
SSL2Q00578 SPC29YPL124W 762 nt4.41□□□□□ -1.7
SSL2Q00578 YPR012WYPR012W 255 nt4.41□□□□□ -1.7
SSL2Q00578 YCL002CYCL002C 792 nt4.41□□□□□ -1.7
SSL2Q00578 RAD18YCR066W 1464 nt4.41□□□□□ -1.7
SSL2Q00578 UBP6YFR010W 1500 nt4.41□□□□□ -1.7
SSL2Q00578 ELM1YKL048C 1923 nt4.4□□□□□ -1.7
SSL2Q00578 PDR5YOR153W 4536 nt4.4□□□□□ -1.7
SSL2Q00578 ROD1YOR018W 2514 nt4.4□□□□□ -1.7
SSL2Q00578 YDL228CYDL228C 642 nt4.4□□□□□ -1.71
SSL2Q00578 YDR248CYDR248C 582 nt4.4□□□□□ -1.71
SSL2Q00578 YGR290WYGR290W 444 nt4.4□□□□□ -1.71
SSL2Q00578 CDC12YHR107C 1224 nt4.4□□□□□ -1.71
SSL2Q00578 FMC1YIL098C 468 nt4.4□□□□□ -1.71
SSL2Q00578 YNK1YKL067W 462 nt4.4□□□□□ -1.71
SSL2Q00578 YLR406C-AYLR406C-A 150 nt4.4□□□□□ -1.71
SSL2Q00578 SEN15YMR059W 387 nt4.4□□□□□ -1.71
SSL2Q00578 YPR174CYPR174C 666 nt4.4□□□□□ -1.71
SSL2Q00578 ERV15YBR210W 429 nt4.4□□□□□ -1.71
SSL2Q00578 YLR446WYLR446W 1302 nt4.4□□□□□ -1.71
SSL2Q00578 BIK1YCL029C 1323 nt4.4□□□□□ -1.71
SSL2Q00578 SWH1YAR042W 3567 nt4.4□□□□□ -1.71
SSL2Q00578 CET1YPL228W 1650 nt4.39□□□□□ -1.71
SSL2Q00578 YDR535CYDR535C 501 nt4.39□□□□□ -1.71
SSL2Q00578 MXR1YER042W 555 nt4.39□□□□□ -1.71
SSL2Q00578 RSM18YER050C 417 nt4.39□□□□□ -1.71
SSL2Q00578 YLR334CYLR334C 381 nt4.39□□□□□ -1.71
SSL2Q00578 MIC27YNL100W 705 nt4.39□□□□□ -1.71
SSL2Q00578 UTP23YOR004W 765 nt4.39□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 28.2 ms