Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.15■□□□□ 0.66
Cdh6P97326 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.15■□□□□ 0.66
Cdh6P97326 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh6P97326 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh6P97326 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh6P97326 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh6P97326 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh6P97326 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh6P97326 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cdh6P97326 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh6P97326 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.14■□□□□ 0.65
Cdh6P97326 Gm10033-202ENSMUST00000211874 928 ntBASIC19.14■□□□□ 0.65
Cdh6P97326 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.14■□□□□ 0.65
Cdh6P97326 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh6P97326 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh6P97326 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh6P97326 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cdh6P97326 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh6P97326 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh6P97326 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cdh6P97326 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh6P97326 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh6P97326 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh6P97326 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh6P97326 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.13■□□□□ 0.65
Cdh6P97326 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.13■□□□□ 0.65
Cdh6P97326 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh6P97326 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh6P97326 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh6P97326 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh6P97326 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh6P97326 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh6P97326 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh6P97326 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh6P97326 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh6P97326 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh6P97326 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh6P97326 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Cdh6P97326 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cdh6P97326 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh6P97326 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.12■□□□□ 0.65
Cdh6P97326 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.12■□□□□ 0.65
Cdh6P97326 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.12■□□□□ 0.65
Cdh6P97326 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh6P97326 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh6P97326 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh6P97326 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh6P97326 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh6P97326 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh6P97326 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh6P97326 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh6P97326 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh6P97326 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh6P97326 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh6P97326 Gm13534-201ENSMUST00000121169 513 ntBASIC19.11■□□□□ 0.65
Cdh6P97326 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh6P97326 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh6P97326 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh6P97326 Iqck-206ENSMUST00000208658 2891 ntBASIC19.1■□□□□ 0.65
Cdh6P97326 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
Cdh6P97326 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh6P97326 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh6P97326 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh6P97326 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh6P97326 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh6P97326 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh6P97326 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh6P97326 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
Cdh6P97326 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh6P97326 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cdh6P97326 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdh6P97326 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdh6P97326 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdh6P97326 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh6P97326 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh6P97326 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh6P97326 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.08■□□□□ 0.64
Cdh6P97326 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh6P97326 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh6P97326 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh6P97326 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh6P97326 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh6P97326 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.08■□□□□ 0.64
Cdh6P97326 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh6P97326 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh6P97326 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh6P97326 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh6P97326 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh6P97326 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh6P97326 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Cdh6P97326 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh6P97326 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cdh6P97326 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh6P97326 AV356131-201ENSMUST00000206201 750 ntBASIC19.07■□□□□ 0.64
Cdh6P97326 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh6P97326 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh6P97326 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh6P97326 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh6P97326 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh6P97326 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms