Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ATRXP46100 RPPH1-201ENST00000516869 333 ntBASIC19.8■□□□□ 0.76
ATRXP46100 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATRXP46100 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.8■□□□□ 0.76
ATRXP46100 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ATRXP46100 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.79■□□□□ 0.76
ATRXP46100 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ATRXP46100 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ATRXP46100 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.79■□□□□ 0.76
ATRXP46100 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ATRXP46100 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.79■□□□□ 0.76
ATRXP46100 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATRXP46100 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATRXP46100 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATRXP46100 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATRXP46100 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATRXP46100 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ATRXP46100 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATRXP46100 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ATRXP46100 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.79■□□□□ 0.76
ATRXP46100 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.79■□□□□ 0.76
ATRXP46100 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.79■□□□□ 0.76
ATRXP46100 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.79■□□□□ 0.76
ATRXP46100 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.78■□□□□ 0.76
ATRXP46100 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATRXP46100 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATRXP46100 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.78■□□□□ 0.76
ATRXP46100 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.78■□□□□ 0.76
ATRXP46100 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.78■□□□□ 0.76
ATRXP46100 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
ATRXP46100 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATRXP46100 AC091874.3-201ENST00000512672 1195 ntBASIC19.78■□□□□ 0.76
ATRXP46100 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.77■□□□□ 0.76
ATRXP46100 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
ATRXP46100 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATRXP46100 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATRXP46100 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.77■□□□□ 0.76
ATRXP46100 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.77■□□□□ 0.76
ATRXP46100 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
ATRXP46100 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATRXP46100 KRT17P2-201ENST00000300992 1314 ntBASIC19.77■□□□□ 0.76
ATRXP46100 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.77■□□□□ 0.75
ATRXP46100 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.77■□□□□ 0.75
ATRXP46100 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
ATRXP46100 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ATRXP46100 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.77■□□□□ 0.75
ATRXP46100 AC010141.2-201ENST00000452426 721 ntBASIC19.77■□□□□ 0.75
ATRXP46100 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.77■□□□□ 0.75
ATRXP46100 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATRXP46100 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATRXP46100 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATRXP46100 AC026396.1-201ENST00000419388 421 ntBASIC19.76■□□□□ 0.75
ATRXP46100 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.76■□□□□ 0.75
ATRXP46100 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ATRXP46100 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ATRXP46100 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATRXP46100 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ATRXP46100 AC097658.1-201ENST00000475555 843 ntBASIC19.76■□□□□ 0.75
ATRXP46100 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.76■□□□□ 0.75
ATRXP46100 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.76■□□□□ 0.75
ATRXP46100 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.75■□□□□ 0.75
ATRXP46100 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATRXP46100 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.75■□□□□ 0.75
ATRXP46100 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATRXP46100 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATRXP46100 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.75■□□□□ 0.75
ATRXP46100 AC007322.4-201ENST00000509611 723 ntBASIC19.75■□□□□ 0.75
ATRXP46100 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.75■□□□□ 0.75
ATRXP46100 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.75■□□□□ 0.75
ATRXP46100 CYP2T3P-201ENST00000601990 817 ntBASIC19.75■□□□□ 0.75
ATRXP46100 OR10C1-204ENST00000622521 1039 ntBASIC19.75■□□□□ 0.75
ATRXP46100 FAM197Y4-202ENST00000622692 608 ntBASIC19.75■□□□□ 0.75
ATRXP46100 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
ATRXP46100 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ATRXP46100 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.74■□□□□ 0.75
ATRXP46100 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ATRXP46100 AC093787.1-201ENST00000450396 207 ntBASIC19.74■□□□□ 0.75
ATRXP46100 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.74■□□□□ 0.75
ATRXP46100 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.74■□□□□ 0.75
ATRXP46100 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.74■□□□□ 0.75
ATRXP46100 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ATRXP46100 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATRXP46100 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATRXP46100 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
ATRXP46100 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.73■□□□□ 0.75
ATRXP46100 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATRXP46100 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATRXP46100 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.73■□□□□ 0.75
ATRXP46100 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.73■□□□□ 0.75
ATRXP46100 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
ATRXP46100 DUSP8P5-201ENST00000422884 1815 ntBASIC19.73■□□□□ 0.75
ATRXP46100 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATRXP46100 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATRXP46100 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ATRXP46100 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.73■□□□□ 0.75
ATRXP46100 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATRXP46100 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATRXP46100 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.73■□□□□ 0.75
ATRXP46100 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.72■□□□□ 0.75
ATRXP46100 AC009237.3-201ENST00000393279 1427 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms