Protein–RNA interactions for Protein: P45978

SCD6, Protein SCD6, yeastyeast

Known RBP RIP-Chip data

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCD6P45978 GCD1YOR260W 1737 nt3.66□□□□□ -1.82
SCD6P45978 PRS5YOL061W 1491 nt3.66□□□□□ -1.82
SCD6P45978 DBP3YGL078C 1572 nt3.65□□□□□ -1.82 RIP-Chip
SCD6P45978 AI3Q0060 1248 nt3.65□□□□□ -1.83
SCD6P45978 ATP5YDR298C 639 nt3.65□□□□□ -1.83
SCD6P45978 YGL138CYGL138C 1038 nt3.65□□□□□ -1.83
SCD6P45978 ERV29YGR284C 933 nt3.65□□□□□ -1.83
SCD6P45978 SPO11YHL022C 1197 nt3.65□□□□□ -1.83
SCD6P45978 YPT35YHR105W 645 nt3.65□□□□□ -1.83
SCD6P45978 YAL065CYAL065C 387 nt3.65□□□□□ -1.83
SCD6P45978 SAM37YMR060C 984 nt3.65□□□□□ -1.83
SCD6P45978 YNR071CYNR071C 1029 nt3.65□□□□□ -1.83
SCD6P45978 PFK27YOL136C 1194 nt3.65□□□□□ -1.83
SCD6P45978 GRX5YPL059W 453 nt3.65□□□□□ -1.83
SCD6P45978 MCM16YPR046W 546 nt3.65□□□□□ -1.83
SCD6P45978 YBR103C-AYBR103C-A 144 nt3.65□□□□□ -1.83
SCD6P45978 HOS3YPL116W 2094 nt3.65□□□□□ -1.83 RIP-Chip
SCD6P45978 SLI1YGR212W 1407 nt3.64□□□□□ -1.83 RIP-Chip
SCD6P45978 HCA4YJL033W 2313 nt3.64□□□□□ -1.83
SCD6P45978 TAF1YGR274C 3201 nt3.64□□□□□ -1.83 RIP-Chip
SCD6P45978 RPS18AYDR450W 441 nt3.64□□□□□ -1.83
SCD6P45978 RPS8BYER102W 603 nt3.64□□□□□ -1.83
SCD6P45978 YFL012WYFL012W 447 nt3.64□□□□□ -1.83
SCD6P45978 CAP2YIL034C 864 nt3.64□□□□□ -1.83
SCD6P45978 AHP1YLR109W 531 nt3.64□□□□□ -1.83
SCD6P45978 URA5YML106W 681 nt3.64□□□□□ -1.83
SCD6P45978 YMR099CYMR099C 894 nt3.64□□□□□ -1.83
SCD6P45978 YMR122W-AYMR122W-A 255 nt3.64□□□□□ -1.83
SCD6P45978 END3YNL084C 1050 nt3.64□□□□□ -1.83 RIP-Chip
SCD6P45978 RPS8AYBL072C 603 nt3.64□□□□□ -1.83
SCD6P45978 YBR116CYBR116C 528 nt3.64□□□□□ -1.83
SCD6P45978 YNR063WYNR063W 1824 nt3.64□□□□□ -1.83
SCD6P45978 PIM1YBL022C 3402 nt3.64□□□□□ -1.83 RIP-Chip
SCD6P45978 YLR152CYLR152C 1731 nt3.64□□□□□ -1.83
SCD6P45978 ELM1YKL048C 1923 nt3.64□□□□□ -1.83 RIP-Chip
SCD6P45978 RPN9YDR427W 1182 nt3.63□□□□□ -1.83
SCD6P45978 FMP10YER182W 735 nt3.63□□□□□ -1.83
SCD6P45978 YGL204CYGL204C 306 nt3.63□□□□□ -1.83
SCD6P45978 RSM27YGR215W 333 nt3.63□□□□□ -1.83 RIP-Chip
SCD6P45978 YIL156W-AYIL156W-A 402 nt3.63□□□□□ -1.83
SCD6P45978 REE1YJL217W 597 nt3.63□□□□□ -1.83
SCD6P45978 MTR2YKL186C 555 nt3.63□□□□□ -1.83
SCD6P45978 SMD2YLR275W 333 nt3.63□□□□□ -1.83
SCD6P45978 ILV5YLR355C 1188 nt3.63□□□□□ -1.83 RIP-Chip
SCD6P45978 SRT1YMR101C 1032 nt3.63□□□□□ -1.83
SCD6P45978 RCE1YMR274C 948 nt3.63□□□□□ -1.83
SCD6P45978 YBL068W-AYBL068W-A 237 nt3.63□□□□□ -1.83
SCD6P45978 RPS11BYBR048W 471 nt3.63□□□□□ -1.83
SCD6P45978 HPA2YPR193C 471 nt3.63□□□□□ -1.83 RIP-Chip
SCD6P45978 ALA1YOR335C 2877 nt3.63□□□□□ -1.83
SCD6P45978 APL4YPR029C 2499 nt3.63□□□□□ -1.83
SCD6P45978 DAN4YJR151C 3486 nt3.63□□□□□ -1.83 RIP-Chip
SCD6P45978 TRS120YDR407C 3870 nt3.62□□□□□ -1.83
SCD6P45978 DSL1YNL258C 2265 nt3.62□□□□□ -1.83
SCD6P45978 SHQ1YIL104C 1524 nt3.62□□□□□ -1.83
SCD6P45978 ATP16YDL004W 483 nt3.62□□□□□ -1.83
SCD6P45978 OPI6YDL096C 327 nt3.62□□□□□ -1.83
SCD6P45978 SRB7YDR308C 423 nt3.62□□□□□ -1.83
SCD6P45978 IZH1YDR492W 951 nt3.62□□□□□ -1.83
SCD6P45978 PAU10YDR542W 363 nt3.62□□□□□ -1.83 RIP-Chip
SCD6P45978 YFL051CYFL051C 483 nt3.62□□□□□ -1.83
SCD6P45978 PAU11YGL261C 363 nt3.62□□□□□ -1.83
SCD6P45978 PAU13YHL046C 363 nt3.62□□□□□ -1.83 RIP-Chip
SCD6P45978 YHI9YHR029C 885 nt3.62□□□□□ -1.83
SCD6P45978 GCD14YJL125C 1152 nt3.62□□□□□ -1.83 RIP-Chip
SCD6P45978 MET14YKL001C 609 nt3.62□□□□□ -1.83
SCD6P45978 PAU4YLR461W 363 nt3.62□□□□□ -1.83 RIP-Chip
SCD6P45978 ARG80YMR042W 534 nt3.62□□□□□ -1.83
SCD6P45978 FMP41YNL168C 780 nt3.62□□□□□ -1.83
SCD6P45978 RPL18AYOL120C 561 nt3.62□□□□□ -1.83
SCD6P45978 HUA2YOR284W 732 nt3.62□□□□□ -1.83
SCD6P45978 DIM1YPL266W 957 nt3.62□□□□□ -1.83
SCD6P45978 MRPL51YPR100W 423 nt3.62□□□□□ -1.83
SCD6P45978 TRS85YDR108W 2097 nt3.62□□□□□ -1.83 RIP-Chip
SCD6P45978 SPA2YLL021W 4401 nt3.62□□□□□ -1.83 RIP-Chip
SCD6P45978 MNR2YKL064W 2910 nt3.62□□□□□ -1.83
SCD6P45978 SPT14YPL175W 1359 nt3.62□□□□□ -1.83
SCD6P45978 SST2YLR452C 2097 nt3.61□□□□□ -1.83 RIP-Chip
SCD6P45978 BI3Q0115 1554 nt3.61□□□□□ -1.83
SCD6P45978 UBC9YDL064W 474 nt3.61□□□□□ -1.83
SCD6P45978 YEL010WYEL010W 351 nt3.61□□□□□ -1.83
SCD6P45978 tK(UUU)DtK(UUU)D 73 nt3.61□□□□□ -1.83
SCD6P45978 tK(UUU)G1tK(UUU)G1 73 nt3.61□□□□□ -1.83
SCD6P45978 tK(UUU)G2tK(UUU)G2 73 nt3.61□□□□□ -1.83
SCD6P45978 tK(UUU)KtK(UUU)K 73 nt3.61□□□□□ -1.83
SCD6P45978 tK(UUU)LtK(UUU)L 73 nt3.61□□□□□ -1.83
SCD6P45978 tK(UUU)OtK(UUU)O 73 nt3.61□□□□□ -1.83
SCD6P45978 tK(UUU)PtK(UUU)P 73 nt3.61□□□□□ -1.83
SCD6P45978 YHR054CYHR054C 1065 nt3.61□□□□□ -1.83 RIP-Chip
SCD6P45978 YJL156W-AYJL156W-A 222 nt3.61□□□□□ -1.83
SCD6P45978 CAF20YOR276W 486 nt3.61□□□□□ -1.83
SCD6P45978 PRM4YPL156C 855 nt3.61□□□□□ -1.83 RIP-Chip
SCD6P45978 MSR1YHR091C 1932 nt3.61□□□□□ -1.83 RIP-Chip
SCD6P45978 RRP5YMR229C 5190 nt3.61□□□□□ -1.83
SCD6P45978 COG7YGL005C 840 nt3.6□□□□□ -1.83
SCD6P45978 YJR128WYJR128W 360 nt3.6□□□□□ -1.83
SCD6P45978 CSM3YMR048W 954 nt3.6□□□□□ -1.83
SCD6P45978 YMR158C-AYMR158C-A 138 nt3.6□□□□□ -1.83
SCD6P45978 YPR108W-AYPR108W-A 213 nt3.6□□□□□ -1.83
SCD6P45978 CBP6YBR120C 489 nt3.6□□□□□ -1.83 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 20 ms