Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	RSC3	YDR303C	2658 nt		4.32	□□□□□ -1.72
CAF16	P43569	MCP2	YLR253W	1710 nt		4.32	□□□□□ -1.72
CAF16	P43569	YGR117C	YGR117C	1431 nt		4.31	□□□□□ -1.72
CAF16	P43569	LAS21	YJL062W	2493 nt		4.31	□□□□□ -1.72
CAF16	P43569	ARP2	YDL029W	1176 nt		4.31	□□□□□ -1.72
CAF16	P43569	tN(GUU)C	tN(GUU)C	74 nt		4.31	□□□□□ -1.72
CAF16	P43569	tN(GUU)F	tN(GUU)F	74 nt		4.31	□□□□□ -1.72
CAF16	P43569	tN(GUU)G	tN(GUU)G	74 nt		4.31	□□□□□ -1.72
CAF16	P43569	tN(GUU)K	tN(GUU)K	74 nt		4.31	□□□□□ -1.72
CAF16	P43569	tN(GUU)L	tN(GUU)L	74 nt		4.31	□□□□□ -1.72
CAF16	P43569	THG1	YGR024C	714 nt		4.31	□□□□□ -1.72
CAF16	P43569	tN(GUU)N1	tN(GUU)N1	74 nt		4.31	□□□□□ -1.72
CAF16	P43569	tN(GUU)N2	tN(GUU)N2	74 nt		4.31	□□□□□ -1.72
CAF16	P43569	tN(GUU)O1	tN(GUU)O1	74 nt		4.31	□□□□□ -1.72
CAF16	P43569	tN(GUU)O2	tN(GUU)O2	74 nt		4.31	□□□□□ -1.72
CAF16	P43569	tN(GUU)P	tN(GUU)P	74 nt		4.31	□□□□□ -1.72
CAF16	P43569	YKL023W	YKL023W	834 nt		4.31	□□□□□ -1.72
CAF16	P43569	BET5	YML077W	480 nt		4.31	□□□□□ -1.72
CAF16	P43569	YPL119C-A	YPL119C-A	264 nt		4.31	□□□□□ -1.72
CAF16	P43569	CSM4	YPL200W	471 nt		4.31	□□□□□ -1.72
CAF16	P43569	OM14	YBR230C	405 nt		4.31	□□□□□ -1.72
CAF16	P43569	APJ1	YNL077W	1587 nt		4.31	□□□□□ -1.72
CAF16	P43569	JEM1	YJL073W	1938 nt		4.31	□□□□□ -1.72
CAF16	P43569	TRM44	YPL030W	1704 nt		4.3	□□□□□ -1.72
CAF16	P43569	GCN5	YGR252W	1320 nt		4.3	□□□□□ -1.72
CAF16	P43569	VPS33	YLR396C	2076 nt		4.3	□□□□□ -1.72
CAF16	P43569	YCR001W	YCR001W	315 nt		4.3	□□□□□ -1.72
CAF16	P43569	YDL172C	YDL172C	480 nt		4.3	□□□□□ -1.72
CAF16	P43569	SLU7	YDR088C	1149 nt		4.3	□□□□□ -1.72
CAF16	P43569	YDR340W	YDR340W	303 nt		4.3	□□□□□ -1.72
CAF16	P43569	THO1	YER063W	657 nt		4.3	□□□□□ -1.72
CAF16	P43569	YHL048C-A	YHL048C-A	135 nt		4.3	□□□□□ -1.72
CAF16	P43569	SYS1	YJL004C	612 nt		4.3	□□□□□ -1.72
CAF16	P43569	TVP38	YKR088C	1014 nt		4.3	□□□□□ -1.72
CAF16	P43569	PNP1	YLR209C	936 nt		4.3	□□□□□ -1.72
CAF16	P43569	YMR254C	YMR254C	309 nt		4.3	□□□□□ -1.72
CAF16	P43569	YNL203C	YNL203C	612 nt		4.3	□□□□□ -1.72
CAF16	P43569	TSR4	YOL022C	1227 nt		4.3	□□□□□ -1.72
CAF16	P43569	CBP3	YPL215W	1008 nt		4.3	□□□□□ -1.72
CAF16	P43569	DIB1	YPR082C	432 nt		4.3	□□□□□ -1.72
CAF16	P43569	HUL5	YGL141W	2733 nt		4.3	□□□□□ -1.72
CAF16	P43569	YDL199C	YDL199C	2064 nt		4.3	□□□□□ -1.72
CAF16	P43569	RTT109	YLL002W	1311 nt		4.29	□□□□□ -1.72
CAF16	P43569	DAP2	YHR028C	2457 nt		4.29	□□□□□ -1.72
CAF16	P43569	YCR013C	YCR013C	648 nt		4.29	□□□□□ -1.72
CAF16	P43569	BSC1	YDL037C	987 nt		4.29	□□□□□ -1.72
CAF16	P43569	COX26	YDR119W-A	201 nt		4.29	□□□□□ -1.72
CAF16	P43569	YGR290W	YGR290W	444 nt		4.29	□□□□□ -1.72
CAF16	P43569	YJR157W	YJR157W	363 nt		4.29	□□□□□ -1.72
CAF16	P43569	VMA5	YKL080W	1179 nt		4.29	□□□□□ -1.72
CAF16	P43569	PRM6	YML047C	1059 nt		4.29	□□□□□ -1.72
CAF16	P43569	MCA1	YOR197W	1299 nt		4.29	□□□□□ -1.72
CAF16	P43569	CBC2	YPL178W	627 nt		4.29	□□□□□ -1.72
CAF16	P43569	RDH54	YBR073W	2877 nt		4.29	□□□□□ -1.72
CAF16	P43569	ARP5	YNL059C	2268 nt		4.29	□□□□□ -1.72
CAF16	P43569	STE24	YJR117W	1362 nt		4.28	□□□□□ -1.72
CAF16	P43569	YKL075C	YKL075C	1353 nt		4.28	□□□□□ -1.72
CAF16	P43569	YML096W	YML096W	1578 nt		4.28	□□□□□ -1.72
CAF16	P43569	KIC1	YHR102W	3243 nt		4.28	□□□□□ -1.72
CAF16	P43569	snR56	snR56	88 nt		4.28	□□□□□ -1.72
CAF16	P43569	YDL034W	YDL034W	345 nt		4.28	□□□□□ -1.72
CAF16	P43569	YGL082W	YGL082W	1146 nt		4.28	□□□□□ -1.72
CAF16	P43569	SCEI	Q0160	708 nt		4.28	□□□□□ -1.72
CAF16	P43569	KTI12	YKL110C	942 nt		4.28	□□□□□ -1.72
CAF16	P43569	RPL17A	YKL180W	555 nt		4.28	□□□□□ -1.72
CAF16	P43569	ERG3	YLR056W	1098 nt		4.28	□□□□□ -1.72
CAF16	P43569	NMA1	YLR328W	1206 nt		4.28	□□□□□ -1.72
CAF16	P43569	YLR428C	YLR428C	345 nt		4.28	□□□□□ -1.72
CAF16	P43569	YRO2	YBR054W	1035 nt		4.28	□□□□□ -1.72
CAF16	P43569	MAK3	YPR051W	531 nt		4.28	□□□□□ -1.72
CAF16	P43569	NOP8	YOL144W	1455 nt		4.28	□□□□□ -1.72
CAF16	P43569	OAF3	YKR064W	2592 nt		4.28	□□□□□ -1.72
CAF16	P43569	GCN20	YFR009W	2259 nt		4.28	□□□□□ -1.72
CAF16	P43569	IZH3	YLR023C	1632 nt		4.28	□□□□□ -1.72
CAF16	P43569	YAP1	YML007W	1953 nt		4.27	□□□□□ -1.73
CAF16	P43569	YOL019W	YOL019W	1656 nt		4.27	□□□□□ -1.73
CAF16	P43569	snR5	snR5	204 nt		4.27	□□□□□ -1.73
CAF16	P43569	HSX1	tR(CCU)J	72 nt		4.27	□□□□□ -1.73
CAF16	P43569	YML057C-A	YML057C-A	390 nt		4.27	□□□□□ -1.73
CAF16	P43569	RPA43	YOR340C	981 nt		4.27	□□□□□ -1.73
CAF16	P43569	FYV5	YCL058C	459 nt		4.27	□□□□□ -1.73
CAF16	P43569	RAD54	YGL163C	2697 nt		4.27	□□□□□ -1.73
CAF16	P43569	RSC30	YHR056C	2652 nt		4.27	□□□□□ -1.73
CAF16	P43569	YLR152C	YLR152C	1731 nt		4.26	□□□□□ -1.73
CAF16	P43569	OLE1	YGL055W	1533 nt		4.26	□□□□□ -1.73
CAF16	P43569	MET12	YPL023C	1974 nt		4.26	□□□□□ -1.73
CAF16	P43569	DAD1	YDR016C	285 nt		4.26	□□□□□ -1.73
CAF16	P43569	YDR018C	YDR018C	1191 nt		4.26	□□□□□ -1.73
CAF16	P43569	HOM2	YDR158W	1098 nt		4.26	□□□□□ -1.73
CAF16	P43569	VAB2	YEL005C	849 nt		4.26	□□□□□ -1.73
CAF16	P43569	PEA2	YER149C	1263 nt		4.26	□□□□□ -1.73
CAF16	P43569	SPI1	YER150W	447 nt		4.26	□□□□□ -1.73
CAF16	P43569	NAG1	YGR031C-A	492 nt		4.26	□□□□□ -1.73
CAF16	P43569	GOS1	YHL031C	672 nt		4.26	□□□□□ -1.73
CAF16	P43569	YHL034W-A	YHL034W-A	462 nt		4.26	□□□□□ -1.73
CAF16	P43569	YHR050W-A	YHR050W-A	171 nt		4.26	□□□□□ -1.73
CAF16	P43569	DSE2	YHR143W	978 nt		4.26	□□□□□ -1.73
CAF16	P43569	BET4	YJL031C	984 nt		4.26	□□□□□ -1.73
CAF16	P43569	YJL114W	YJL114W	681 nt		4.26	□□□□□ -1.73
CAF16	P43569	YML053C	YML053C	639 nt		4.26	□□□□□ -1.73

Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms