Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LDB3O75112 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LDB3O75112 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.16■□□□□ 0.82
LDB3O75112 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LDB3O75112 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
LDB3O75112 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
LDB3O75112 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.16■□□□□ 0.82
LDB3O75112 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.16■□□□□ 0.82
LDB3O75112 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LDB3O75112 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LDB3O75112 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LDB3O75112 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LDB3O75112 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LDB3O75112 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.15■□□□□ 0.82
LDB3O75112 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LDB3O75112 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.15■□□□□ 0.82
LDB3O75112 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LDB3O75112 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.15■□□□□ 0.82
LDB3O75112 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LDB3O75112 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
LDB3O75112 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LDB3O75112 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LDB3O75112 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.14■□□□□ 0.81
LDB3O75112 AC009237.3-201ENST00000393279 1427 ntBASIC20.14■□□□□ 0.81
LDB3O75112 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.14■□□□□ 0.81
LDB3O75112 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LDB3O75112 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.14■□□□□ 0.81
LDB3O75112 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LDB3O75112 TPRG1LP1-201ENST00000598702 760 ntBASIC20.14■□□□□ 0.81
LDB3O75112 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LDB3O75112 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
LDB3O75112 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LDB3O75112 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LDB3O75112 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.13■□□□□ 0.81
LDB3O75112 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.13■□□□□ 0.81
LDB3O75112 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
LDB3O75112 AC005224.4-201ENST00000583262 1652 ntBASIC20.13■□□□□ 0.81
LDB3O75112 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LDB3O75112 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.13■□□□□ 0.81
LDB3O75112 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.13■□□□□ 0.81
LDB3O75112 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
LDB3O75112 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LDB3O75112 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LDB3O75112 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.13■□□□□ 0.81
LDB3O75112 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LDB3O75112 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
LDB3O75112 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LDB3O75112 AP006587.3-201ENST00000525742 1516 ntBASIC20.12■□□□□ 0.81
LDB3O75112 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LDB3O75112 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB3O75112 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LDB3O75112 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB3O75112 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LDB3O75112 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB3O75112 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LDB3O75112 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.12■□□□□ 0.81
LDB3O75112 YBX1P1-201ENST00000445822 960 ntBASIC20.12■□□□□ 0.81
LDB3O75112 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.12■□□□□ 0.81
LDB3O75112 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LDB3O75112 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
LDB3O75112 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.12■□□□□ 0.81
LDB3O75112 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB3O75112 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB3O75112 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.12■□□□□ 0.81
LDB3O75112 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB3O75112 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.12■□□□□ 0.81
LDB3O75112 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LDB3O75112 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.12■□□□□ 0.81
LDB3O75112 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LDB3O75112 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LDB3O75112 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LDB3O75112 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LDB3O75112 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
LDB3O75112 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LDB3O75112 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LDB3O75112 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LDB3O75112 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.11■□□□□ 0.81
LDB3O75112 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.11■□□□□ 0.81
LDB3O75112 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.11■□□□□ 0.81
LDB3O75112 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LDB3O75112 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.11■□□□□ 0.81
LDB3O75112 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LDB3O75112 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.11■□□□□ 0.81
LDB3O75112 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LDB3O75112 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LDB3O75112 LINC00565-201ENST00000562710 2331 ntBASIC20.1■□□□□ 0.81
LDB3O75112 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.1■□□□□ 0.81
LDB3O75112 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LDB3O75112 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LDB3O75112 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
LDB3O75112 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LDB3O75112 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LDB3O75112 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LDB3O75112 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.1■□□□□ 0.81
LDB3O75112 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.1■□□□□ 0.81
LDB3O75112 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.1■□□□□ 0.81
LDB3O75112 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LDB3O75112 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.1■□□□□ 0.81
LDB3O75112 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
LDB3O75112 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms