Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm12887B1AVM1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm12887B1AVM1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm12887B1AVM1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Gm12887B1AVM1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm12887B1AVM1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm12887B1AVM1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm12887B1AVM1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm12887B1AVM1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm12887B1AVM1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm12887B1AVM1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm12887B1AVM1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.32■□□□□ 0.04
Gm12887B1AVM1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.32■□□□□ 0.04
Gm12887B1AVM1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm12887B1AVM1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm12887B1AVM1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm12887B1AVM1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm12887B1AVM1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12887B1AVM1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Gm12887B1AVM1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12887B1AVM1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12887B1AVM1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12887B1AVM1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12887B1AVM1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12887B1AVM1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12887B1AVM1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.31■□□□□ 0.04
Gm12887B1AVM1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12887B1AVM1 Gm10232-201ENSMUST00000089221 720 ntBASIC15.31■□□□□ 0.04
Gm12887B1AVM1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.31■□□□□ 0.04
Gm12887B1AVM1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12887B1AVM1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12887B1AVM1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12887B1AVM1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12887B1AVM1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12887B1AVM1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12887B1AVM1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12887B1AVM1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12887B1AVM1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12887B1AVM1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12887B1AVM1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm12887B1AVM1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm12887B1AVM1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm12887B1AVM1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm12887B1AVM1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm12887B1AVM1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.3■□□□□ 0.04
Gm12887B1AVM1 Mir6538-201ENSMUST00000183713 110 ntBASIC15.3■□□□□ 0.04
Gm12887B1AVM1 Gm43566-201ENSMUST00000196851 808 ntBASIC15.3■□□□□ 0.04
Gm12887B1AVM1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm12887B1AVM1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm12887B1AVM1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm12887B1AVM1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm12887B1AVM1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm12887B1AVM1 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.29■□□□□ 0.04
Gm12887B1AVM1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12887B1AVM1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12887B1AVM1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12887B1AVM1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Gm12887B1AVM1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12887B1AVM1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
Gm12887B1AVM1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12887B1AVM1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12887B1AVM1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Gm12887B1AVM1 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.29■□□□□ 0.04
Gm12887B1AVM1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm12887B1AVM1 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.29■□□□□ 0.04
Gm12887B1AVM1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Gm12887B1AVM1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12887B1AVM1 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.29■□□□□ 0.04
Gm12887B1AVM1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12887B1AVM1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12887B1AVM1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12887B1AVM1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12887B1AVM1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12887B1AVM1 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.28■□□□□ 0.04
Gm12887B1AVM1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Gm12887B1AVM1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12887B1AVM1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12887B1AVM1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.28■□□□□ 0.04
Gm12887B1AVM1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12887B1AVM1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12887B1AVM1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.28■□□□□ 0.04
Gm12887B1AVM1 Gm40881-201ENSMUST00000223397 166 ntBASIC15.28■□□□□ 0.04
Gm12887B1AVM1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12887B1AVM1 Gm9870-201ENSMUST00000063874 645 ntBASIC15.28■□□□□ 0.04
Gm12887B1AVM1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Gm12887B1AVM1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12887B1AVM1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Gm12887B1AVM1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Gm12887B1AVM1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Gm12887B1AVM1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Gm12887B1AVM1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12887B1AVM1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12887B1AVM1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.28■□□□□ 0.04
Gm12887B1AVM1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm12887B1AVM1 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.27■□□□□ 0.04
Gm12887B1AVM1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm12887B1AVM1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm12887B1AVM1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Gm12887B1AVM1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Gm12887B1AVM1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms