Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.35□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.35□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Gm10033-202ENSMUST00000211874 928 ntBASIC14.35□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv1-52A0A0A6YXC3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.34□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.34□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Ighv1-52A0A0A6YXC3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.33□□□□□ -0.12
Ighv1-52A0A0A6YXC3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.33□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.32□□□□□ -0.12
Ighv1-52A0A0A6YXC3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-52A0A0A6YXC3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.32□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-52A0A0A6YXC3 AV356131-201ENSMUST00000206201 750 ntBASIC14.32□□□□□ -0.12
Ighv1-52A0A0A6YXC3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ighv1-52A0A0A6YXC3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms