Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV6-7A0A0A0MS04 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.9■□□□□ 0.46
TRBV6-7A0A0A0MS04 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV6-7A0A0A0MS04 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV6-7A0A0A0MS04 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRBV6-7A0A0A0MS04 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV6-7A0A0A0MS04 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV6-7A0A0A0MS04 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV6-7A0A0A0MS04 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 AC006455.2-201ENST00000429931 906 ntBASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 pRNA.6-201ENST00000610482 90 ntBASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 pRNA.5-201ENST00000612139 90 ntBASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 pRNA.11-201ENST00000618423 90 ntBASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 pRNA.13-201ENST00000619112 90 ntBASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 Z98882.1-201ENST00000622160 2253 ntBASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV6-7A0A0A0MS04 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
TRBV6-7A0A0A0MS04 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV6-7A0A0A0MS04 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV6-7A0A0A0MS04 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRBV6-7A0A0A0MS04 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV6-7A0A0A0MS04 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV6-7A0A0A0MS04 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV6-7A0A0A0MS04 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV6-7A0A0A0MS04 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV6-7A0A0A0MS04 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV6-7A0A0A0MS04 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV6-7A0A0A0MS04 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV6-7A0A0A0MS04 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV6-7A0A0A0MS04 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV6-7A0A0A0MS04 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV6-7A0A0A0MS04 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV6-7A0A0A0MS04 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV6-7A0A0A0MS04 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV6-7A0A0A0MS04 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.87■□□□□ 0.45
TRBV6-7A0A0A0MS04 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV6-7A0A0A0MS04 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV6-7A0A0A0MS04 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.87■□□□□ 0.45
TRBV6-7A0A0A0MS04 KRT16P3-201ENST00000439127 1283 ntBASIC17.87■□□□□ 0.45
TRBV6-7A0A0A0MS04 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV6-7A0A0A0MS04 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV6-7A0A0A0MS04 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV6-7A0A0A0MS04 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
TRBV6-7A0A0A0MS04 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.86■□□□□ 0.45
TRBV6-7A0A0A0MS04 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV6-7A0A0A0MS04 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV6-7A0A0A0MS04 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV6-7A0A0A0MS04 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
TRBV6-7A0A0A0MS04 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.86■□□□□ 0.45
TRBV6-7A0A0A0MS04 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.86■□□□□ 0.45
TRBV6-7A0A0A0MS04 AC068587.7-201ENST00000641602 218 ntBASIC17.86■□□□□ 0.45
TRBV6-7A0A0A0MS04 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV6-7A0A0A0MS04 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV6-7A0A0A0MS04 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.86■□□□□ 0.45
TRBV6-7A0A0A0MS04 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV6-7A0A0A0MS04 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV6-7A0A0A0MS04 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV6-7A0A0A0MS04 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV6-7A0A0A0MS04 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRBV6-7A0A0A0MS04 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.86■□□□□ 0.45
TRBV6-7A0A0A0MS04 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV6-7A0A0A0MS04 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV6-7A0A0A0MS04 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TRBV6-7A0A0A0MS04 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TRBV6-7A0A0A0MS04 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV6-7A0A0A0MS04 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV6-7A0A0A0MS04 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV6-7A0A0A0MS04 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.85■□□□□ 0.45
TRBV6-7A0A0A0MS04 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.85■□□□□ 0.45
TRBV6-7A0A0A0MS04 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.85■□□□□ 0.45
TRBV6-7A0A0A0MS04 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV6-7A0A0A0MS04 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV6-7A0A0A0MS04 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.85■□□□□ 0.45
TRBV6-7A0A0A0MS04 OR7E47P-201ENST00000546390 1422 ntBASIC17.85■□□□□ 0.45
TRBV6-7A0A0A0MS04 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV6-7A0A0A0MS04 AC099791.2-201ENST00000605725 427 ntBASIC17.85■□□□□ 0.45
TRBV6-7A0A0A0MS04 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV6-7A0A0A0MS04 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRBV6-7A0A0A0MS04 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV6-7A0A0A0MS04 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV6-7A0A0A0MS04 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms