Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV27A0A087WT01 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV27A0A087WT01 OXCT2P1-201ENST00000447263 1535 ntBASIC19.38■□□□□ 0.69
TRAV27A0A087WT01 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
TRAV27A0A087WT01 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.38■□□□□ 0.69
TRAV27A0A087WT01 AF106564.1-201ENST00000607058 2553 ntBASIC19.38■□□□□ 0.69
TRAV27A0A087WT01 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
TRAV27A0A087WT01 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TRAV27A0A087WT01 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAV27A0A087WT01 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV27A0A087WT01 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 SLC47A1P1-202ENST00000449666 945 ntBASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 AC136469.2-201ENST00000623944 1028 ntBASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV27A0A087WT01 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRAV27A0A087WT01 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV27A0A087WT01 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TRAV27A0A087WT01 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRAV27A0A087WT01 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.36■□□□□ 0.69
TRAV27A0A087WT01 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV27A0A087WT01 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.36■□□□□ 0.69
TRAV27A0A087WT01 AC011298.3-201ENST00000615796 283 ntBASIC19.36■□□□□ 0.69
TRAV27A0A087WT01 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV27A0A087WT01 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV27A0A087WT01 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV27A0A087WT01 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV27A0A087WT01 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV27A0A087WT01 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.35■□□□□ 0.69
TRAV27A0A087WT01 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV27A0A087WT01 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV27A0A087WT01 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.35■□□□□ 0.69
TRAV27A0A087WT01 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.35■□□□□ 0.69
TRAV27A0A087WT01 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRAV27A0A087WT01 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TRAV27A0A087WT01 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.35■□□□□ 0.69
TRAV27A0A087WT01 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV27A0A087WT01 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV27A0A087WT01 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV27A0A087WT01 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.35■□□□□ 0.69
TRAV27A0A087WT01 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV27A0A087WT01 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV27A0A087WT01 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV27A0A087WT01 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV27A0A087WT01 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.34■□□□□ 0.69
TRAV27A0A087WT01 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV27A0A087WT01 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
TRAV27A0A087WT01 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.34■□□□□ 0.69
TRAV27A0A087WT01 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV27A0A087WT01 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV27A0A087WT01 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV27A0A087WT01 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TRAV27A0A087WT01 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV27A0A087WT01 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV27A0A087WT01 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV27A0A087WT01 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.33■□□□□ 0.69
TRAV27A0A087WT01 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
TRAV27A0A087WT01 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
TRAV27A0A087WT01 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.33■□□□□ 0.69
TRAV27A0A087WT01 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.33■□□□□ 0.69
TRAV27A0A087WT01 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV27A0A087WT01 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAV27A0A087WT01 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV27A0A087WT01 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAV27A0A087WT01 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV27A0A087WT01 AC104564.3-201ENST00000582367 638 ntBASIC19.33■□□□□ 0.68
TRAV27A0A087WT01 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV27A0A087WT01 FEM1AP4-201ENST00000443167 1987 ntBASIC19.33■□□□□ 0.68
TRAV27A0A087WT01 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAV27A0A087WT01 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAV27A0A087WT01 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV27A0A087WT01 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV27A0A087WT01 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAV27A0A087WT01 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV27A0A087WT01 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV27A0A087WT01 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV27A0A087WT01 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
TRAV27A0A087WT01 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.32■□□□□ 0.68
TRAV27A0A087WT01 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms