Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 IGF2BP1-202ENST00000431824 1317 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 TRNT1-202ENST00000280591 2180 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 USP14-202ENST00000383589 2168 ntTSL 5 BASIC12.35□□□□□ -0.43
SLC1A1P43005 SLC24A3-202ENST00000613834 3694 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SLC1A1P43005 GRHL3-203ENST00000356046 2804 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 TUBGCP5-205ENST00000615383 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 ZFAND4-202ENST00000344646 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 AL160006.1-201ENST00000554749 4216 ntBASIC12.34□□□□□ -0.43
SLC1A1P43005 LHX6-203ENST00000373755 3384 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 TROAP-215ENST00000551245 2771 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
SLC1A1P43005 NIPAL1-201ENST00000295461 5300 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 PRKG2-202ENST00000395578 3431 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SLC1A1P43005 INPP5K-203ENST00000406424 3194 ntTSL 5 BASIC12.34□□□□□ -0.43
SLC1A1P43005 CYP11B2-201ENST00000323110 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 FAM86B2-201ENST00000262365 1268 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
SLC1A1P43005 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SLC1A1P43005 KRTAP19-4-201ENST00000334058 310 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SLC1A1P43005 RNU12-201ENST00000362512 150 ntBASIC12.34□□□□□ -0.43
SLC1A1P43005 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 U2AF1L4-202ENST00000378975 747 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 CLK2P1-201ENST00000416636 1294 ntBASIC12.34□□□□□ -0.43
SLC1A1P43005 TRGV2-201ENST00000426402 544 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SLC1A1P43005 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC12.34□□□□□ -0.43
SLC1A1P43005 CDRT15P2-201ENST00000447470 416 ntBASIC12.34□□□□□ -0.43
SLC1A1P43005 AL157413.1-201ENST00000458461 823 ntTSL 5 BASIC12.34□□□□□ -0.43
SLC1A1P43005 RN7SL454P-201ENST00000492744 243 ntBASIC12.34□□□□□ -0.43
SLC1A1P43005 AC093772.1-202ENST00000504050 645 ntTSL 5 BASIC12.34□□□□□ -0.43
SLC1A1P43005 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC12.34□□□□□ -0.43
SLC1A1P43005 AP006287.1-201ENST00000533995 653 ntBASIC12.34□□□□□ -0.43
SLC1A1P43005 AC009654.1-201ENST00000560503 757 ntTSL 3 BASIC12.34□□□□□ -0.43
SLC1A1P43005 AC009065.7-201ENST00000561544 580 ntTSL 3 BASIC12.34□□□□□ -0.43
SLC1A1P43005 TMEM208-210ENST00000565201 832 ntTSL 2 BASIC12.34□□□□□ -0.43
SLC1A1P43005 TMEM95-203ENST00000576060 622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 AC006236.1-201ENST00000576249 797 ntBASIC12.34□□□□□ -0.43
SLC1A1P43005 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 AC018755.1-201ENST00000601315 1182 ntBASIC12.34□□□□□ -0.43
SLC1A1P43005 AC016773.1-201ENST00000605571 802 ntBASIC12.34□□□□□ -0.43
SLC1A1P43005 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 CLEC4M-208ENST00000596363 1669 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 LINGO4-201ENST00000368820 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 STAT6-205ENST00000543873 3119 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SLC1A1P43005 AC027801.2-201ENST00000515692 1816 ntTSL 5 BASIC12.34□□□□□ -0.43
SLC1A1P43005 AL353611.2-201ENST00000625008 2897 ntBASIC12.34□□□□□ -0.43
SLC1A1P43005 SYNPO-204ENST00000519664 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 SHPRH-211ENST00000629427 7338 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
SLC1A1P43005 RAPGEF3-201ENST00000389212 3294 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
SLC1A1P43005 AP000787.1-206ENST00000543150 1567 ntTSL 5 BASIC12.34□□□□□ -0.43
SLC1A1P43005 HEXA-209ENST00000567159 1582 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 MAGEC2-201ENST00000247452 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 TACC2-204ENST00000360561 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 MYEF2-217ENST00000620867 1742 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 DIAPH2-203ENST00000373049 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC1A1P43005 CYP1B1-204ENST00000494864 1479 ntTSL 5 BASIC12.34□□□□□ -0.43
SLC1A1P43005 RAPGEF3-204ENST00000405493 5751 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.43
SLC1A1P43005 DUSP27-202ENST00000361200 4164 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
SLC1A1P43005 BTNL3-201ENST00000342868 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SLC1A1P43005 CDH5-208ENST00000614547 3779 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
SLC1A1P43005 AC091170.1-201ENST00000582983 2190 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 RGN-201ENST00000336169 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SLC1A1P43005 PAX6-243ENST00000638903 2620 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 THRAP3-201ENST00000354618 4432 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 LINC02080-201ENST00000585863 3085 ntTSL 2 BASIC12.33□□□□□ -0.44
SLC1A1P43005 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC12.33□□□□□ -0.44
SLC1A1P43005 GIMAP5-207ENST00000498181 1835 ntAPPRIS P1 TSL 4 BASIC12.33□□□□□ -0.44
SLC1A1P43005 CBLB-203ENST00000403724 3350 ntTSL 2 BASIC12.33□□□□□ -0.44
SLC1A1P43005 WDR59-223ENST00000616369 1953 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 GSTM5-203ENST00000369813 4370 ntTSL 2 BASIC12.33□□□□□ -0.44
SLC1A1P43005 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 PDXDC1-202ENST00000396410 4521 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 ZNF816-201ENST00000270457 582 ntTSL 3 BASIC12.33□□□□□ -0.44
SLC1A1P43005 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SLC1A1P43005 ZNF140-201ENST00000319849 596 ntTSL 5 BASIC12.33□□□□□ -0.44
SLC1A1P43005 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 AL157414.1-201ENST00000366097 770 ntTSL 3 BASIC12.33□□□□□ -0.44
SLC1A1P43005 MGST3-201ENST00000367883 706 ntTSL 3 BASIC12.33□□□□□ -0.44
SLC1A1P43005 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC12.33□□□□□ -0.44
SLC1A1P43005 AC244453.1-201ENST00000427872 494 ntTSL 3 BASIC12.33□□□□□ -0.44
SLC1A1P43005 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC12.33□□□□□ -0.44
SLC1A1P43005 ARSDP1-201ENST00000443820 1215 ntBASIC12.33□□□□□ -0.44
SLC1A1P43005 AC246680.1-201ENST00000444624 494 ntTSL 3 BASIC12.33□□□□□ -0.44
SLC1A1P43005 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC12.33□□□□□ -0.44
SLC1A1P43005 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 FAM86KP-201ENST00000509817 987 ntBASIC12.33□□□□□ -0.44
SLC1A1P43005 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 AC091163.2-201ENST00000519032 460 ntTSL 5 BASIC12.33□□□□□ -0.44
SLC1A1P43005 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC12.33□□□□□ -0.44
SLC1A1P43005 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC12.33□□□□□ -0.44
SLC1A1P43005 ENO1P2-201ENST00000557166 974 ntBASIC12.33□□□□□ -0.44
SLC1A1P43005 HNRNPA1P62-201ENST00000559372 952 ntBASIC12.33□□□□□ -0.44
SLC1A1P43005 MPI-212ENST00000565576 1148 ntTSL 2 BASIC12.33□□□□□ -0.44
SLC1A1P43005 AC004134.1-201ENST00000587835 225 ntBASIC12.33□□□□□ -0.44
SLC1A1P43005 AC015849.1-201ENST00000605548 662 ntTSL 3 BASIC12.33□□□□□ -0.44
SLC1A1P43005 COL5A2-203ENST00000618828 6399 ntTSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms