Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.23■□□□□ 0.83
GPC6Q9Y625 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.23■□□□□ 0.83
GPC6Q9Y625 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GPC6Q9Y625 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
GPC6Q9Y625 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.22■□□□□ 0.83
GPC6Q9Y625 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
GPC6Q9Y625 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.22■□□□□ 0.83
GPC6Q9Y625 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GPC6Q9Y625 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GPC6Q9Y625 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.22■□□□□ 0.83
GPC6Q9Y625 AC099791.2-201ENST00000605725 427 ntBASIC20.22■□□□□ 0.83
GPC6Q9Y625 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.22■□□□□ 0.83
GPC6Q9Y625 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GPC6Q9Y625 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GPC6Q9Y625 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
GPC6Q9Y625 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.22■□□□□ 0.83
GPC6Q9Y625 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GPC6Q9Y625 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
GPC6Q9Y625 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.21■□□□□ 0.83
GPC6Q9Y625 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GPC6Q9Y625 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
GPC6Q9Y625 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
GPC6Q9Y625 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.21■□□□□ 0.83
GPC6Q9Y625 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.21■□□□□ 0.83
GPC6Q9Y625 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.21■□□□□ 0.83
GPC6Q9Y625 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GPC6Q9Y625 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.2■□□□□ 0.82
GPC6Q9Y625 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
GPC6Q9Y625 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.2■□□□□ 0.82
GPC6Q9Y625 DUX4L19-201ENST00000557448 1267 ntBASIC20.2■□□□□ 0.82
GPC6Q9Y625 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.2■□□□□ 0.82
GPC6Q9Y625 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.2■□□□□ 0.82
GPC6Q9Y625 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
GPC6Q9Y625 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GPC6Q9Y625 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GPC6Q9Y625 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
GPC6Q9Y625 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GPC6Q9Y625 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GPC6Q9Y625 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
GPC6Q9Y625 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GPC6Q9Y625 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
GPC6Q9Y625 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.19■□□□□ 0.82
GPC6Q9Y625 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GPC6Q9Y625 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
GPC6Q9Y625 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
GPC6Q9Y625 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GPC6Q9Y625 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GPC6Q9Y625 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.19■□□□□ 0.82
GPC6Q9Y625 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.18■□□□□ 0.82
GPC6Q9Y625 AF106564.1-201ENST00000607058 2553 ntBASIC20.18■□□□□ 0.82
GPC6Q9Y625 AC010542.4-201ENST00000563151 1910 ntBASIC20.18■□□□□ 0.82
GPC6Q9Y625 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
GPC6Q9Y625 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GPC6Q9Y625 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GPC6Q9Y625 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.18■□□□□ 0.82
GPC6Q9Y625 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GPC6Q9Y625 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GPC6Q9Y625 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
GPC6Q9Y625 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
GPC6Q9Y625 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.17■□□□□ 0.82
GPC6Q9Y625 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
GPC6Q9Y625 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GPC6Q9Y625 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GPC6Q9Y625 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GPC6Q9Y625 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.17■□□□□ 0.82
GPC6Q9Y625 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.17■□□□□ 0.82
GPC6Q9Y625 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GPC6Q9Y625 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GPC6Q9Y625 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
GPC6Q9Y625 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GPC6Q9Y625 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
GPC6Q9Y625 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.16■□□□□ 0.82
GPC6Q9Y625 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GPC6Q9Y625 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GPC6Q9Y625 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
GPC6Q9Y625 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GPC6Q9Y625 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GPC6Q9Y625 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GPC6Q9Y625 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GPC6Q9Y625 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GPC6Q9Y625 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
GPC6Q9Y625 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GPC6Q9Y625 AC006455.2-201ENST00000429931 906 ntBASIC20.16■□□□□ 0.82
GPC6Q9Y625 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.16■□□□□ 0.82
GPC6Q9Y625 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.16■□□□□ 0.82
GPC6Q9Y625 AL031602.1-201ENST00000633169 911 ntBASIC20.16■□□□□ 0.82
GPC6Q9Y625 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GPC6Q9Y625 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
GPC6Q9Y625 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GPC6Q9Y625 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.16■□□□□ 0.82
GPC6Q9Y625 AC133637.1-201ENST00000624115 1537 ntBASIC20.16■□□□□ 0.82
GPC6Q9Y625 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
GPC6Q9Y625 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GPC6Q9Y625 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.16■□□□□ 0.82
GPC6Q9Y625 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GPC6Q9Y625 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.15■□□□□ 0.82
GPC6Q9Y625 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
GPC6Q9Y625 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.15■□□□□ 0.82
GPC6Q9Y625 SYT6-210ENST00000641643 1587 ntBASIC20.15■□□□□ 0.82
GPC6Q9Y625 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms