Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PCDHGA4Q9Y5G9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHGA4Q9Y5G9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 AC010525.1-201ENST00000585559 441 ntBASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 NTF6G-201ENST00000591094 616 ntBASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDHGA4Q9Y5G9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 LINC00565-201ENST00000562710 2331 ntBASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA4Q9Y5G9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA4Q9Y5G9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHGA4Q9Y5G9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
PCDHGA4Q9Y5G9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHGA4Q9Y5G9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PCDHGA4Q9Y5G9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHGA4Q9Y5G9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHGA4Q9Y5G9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDHGA4Q9Y5G9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PCDHGA4Q9Y5G9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA4Q9Y5G9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHGA4Q9Y5G9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PCDHGA4Q9Y5G9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA4Q9Y5G9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA4Q9Y5G9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA4Q9Y5G9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA4Q9Y5G9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHGA4Q9Y5G9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA4Q9Y5G9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PCDHGA4Q9Y5G9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.02■□□□□ 0.96
PCDHGA4Q9Y5G9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHGA4Q9Y5G9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.02■□□□□ 0.96
PCDHGA4Q9Y5G9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA4Q9Y5G9 KRT18P14-201ENST00000534205 1250 ntBASIC21.02■□□□□ 0.96
PCDHGA4Q9Y5G9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PCDHGA4Q9Y5G9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA4Q9Y5G9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PCDHGA4Q9Y5G9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDHGA4Q9Y5G9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDHGA4Q9Y5G9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDHGA4Q9Y5G9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA4Q9Y5G9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHGA4Q9Y5G9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA4Q9Y5G9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PCDHGA4Q9Y5G9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA4Q9Y5G9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA4Q9Y5G9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA4Q9Y5G9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHGA4Q9Y5G9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA4Q9Y5G9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PCDHGA4Q9Y5G9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA4Q9Y5G9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHGA4Q9Y5G9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA4Q9Y5G9 LINC01960-201ENST00000563759 1884 ntBASIC21.01■□□□□ 0.95
PCDHGA4Q9Y5G9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms