Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB7Q9Y5E2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB7Q9Y5E2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
PCDHB7Q9Y5E2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB7Q9Y5E2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
PCDHB7Q9Y5E2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB7Q9Y5E2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB7Q9Y5E2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB7Q9Y5E2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB7Q9Y5E2 CNN2P6-201ENST00000439038 900 ntBASIC23.21■■□□□ 1.31
PCDHB7Q9Y5E2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.21■■□□□ 1.31
PCDHB7Q9Y5E2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
PCDHB7Q9Y5E2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB7Q9Y5E2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.21■■□□□ 1.31
PCDHB7Q9Y5E2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
PCDHB7Q9Y5E2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.21■■□□□ 1.31
PCDHB7Q9Y5E2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHB7Q9Y5E2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB7Q9Y5E2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB7Q9Y5E2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB7Q9Y5E2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB7Q9Y5E2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHB7Q9Y5E2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB7Q9Y5E2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB7Q9Y5E2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB7Q9Y5E2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
PCDHB7Q9Y5E2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB7Q9Y5E2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB7Q9Y5E2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.2■■□□□ 1.3
PCDHB7Q9Y5E2 AF201337.1-201ENST00000520239 748 ntBASIC23.2■■□□□ 1.3
PCDHB7Q9Y5E2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
PCDHB7Q9Y5E2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.2■■□□□ 1.3
PCDHB7Q9Y5E2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB7Q9Y5E2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHB7Q9Y5E2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB7Q9Y5E2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHB7Q9Y5E2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB7Q9Y5E2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHB7Q9Y5E2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
PCDHB7Q9Y5E2 AL138781.1-201ENST00000566567 1274 ntBASIC23.19■■□□□ 1.3
PCDHB7Q9Y5E2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHB7Q9Y5E2 TMEM191A-211ENST00000637163 1067 ntBASIC23.19■■□□□ 1.3
PCDHB7Q9Y5E2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.19■■□□□ 1.3
PCDHB7Q9Y5E2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHB7Q9Y5E2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
PCDHB7Q9Y5E2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.18■■□□□ 1.3
PCDHB7Q9Y5E2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHB7Q9Y5E2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB7Q9Y5E2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB7Q9Y5E2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB7Q9Y5E2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHB7Q9Y5E2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB7Q9Y5E2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
PCDHB7Q9Y5E2 AC105036.2-201ENST00000569468 176 ntBASIC23.18■■□□□ 1.3
PCDHB7Q9Y5E2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHB7Q9Y5E2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB7Q9Y5E2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB7Q9Y5E2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHB7Q9Y5E2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB7Q9Y5E2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.17■■□□□ 1.3
PCDHB7Q9Y5E2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB7Q9Y5E2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHB7Q9Y5E2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.17■■□□□ 1.3
PCDHB7Q9Y5E2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHB7Q9Y5E2 KRT18P6-201ENST00000555540 1265 ntBASIC23.17■■□□□ 1.3
PCDHB7Q9Y5E2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.17■■□□□ 1.3
PCDHB7Q9Y5E2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.17■■□□□ 1.3
PCDHB7Q9Y5E2 EEF1DP3-203ENST00000566025 782 ntBASIC23.17■■□□□ 1.3
PCDHB7Q9Y5E2 AC133552.2-202ENST00000575694 574 ntBASIC23.17■■□□□ 1.3
PCDHB7Q9Y5E2 AC053503.5-201ENST00000601508 636 ntBASIC23.17■■□□□ 1.3
PCDHB7Q9Y5E2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB7Q9Y5E2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHB7Q9Y5E2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PCDHB7Q9Y5E2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHB7Q9Y5E2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB7Q9Y5E2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHB7Q9Y5E2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB7Q9Y5E2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
PCDHB7Q9Y5E2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB7Q9Y5E2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB7Q9Y5E2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.16■■□□□ 1.3
PCDHB7Q9Y5E2 SLC7A5P1-201ENST00000568957 537 ntBASIC23.16■■□□□ 1.3
PCDHB7Q9Y5E2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHB7Q9Y5E2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHB7Q9Y5E2 AP006587.3-201ENST00000525742 1516 ntBASIC23.16■■□□□ 1.3
PCDHB7Q9Y5E2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
PCDHB7Q9Y5E2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHB7Q9Y5E2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHB7Q9Y5E2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB7Q9Y5E2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB7Q9Y5E2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB7Q9Y5E2 TERF1P5-201ENST00000477545 1207 ntBASIC23.15■■□□□ 1.3
PCDHB7Q9Y5E2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB7Q9Y5E2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB7Q9Y5E2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHB7Q9Y5E2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PCDHB7Q9Y5E2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB7Q9Y5E2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB7Q9Y5E2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHB7Q9Y5E2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms