Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC007322.4-201ENST00000509611 723 ntBASIC32.28■■■□□ 2.76
SHANK2Q9UPX8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
SHANK2Q9UPX8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
SHANK2Q9UPX8 AC137767.1-201ENST00000602918 1920 ntBASIC32.27■■■□□ 2.76
SHANK2Q9UPX8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SHANK2Q9UPX8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC32.27■■■□□ 2.76
SHANK2Q9UPX8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC32.27■■■□□ 2.76
SHANK2Q9UPX8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC32.27■■■□□ 2.76
SHANK2Q9UPX8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC32.27■■■□□ 2.76
SHANK2Q9UPX8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
SHANK2Q9UPX8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC32.27■■■□□ 2.76
SHANK2Q9UPX8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC32.27■■■□□ 2.76
SHANK2Q9UPX8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SHANK2Q9UPX8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
SHANK2Q9UPX8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC32.27■■■□□ 2.76
SHANK2Q9UPX8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
SHANK2Q9UPX8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
SHANK2Q9UPX8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC32.26■■■□□ 2.76
SHANK2Q9UPX8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
SHANK2Q9UPX8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
SHANK2Q9UPX8 CYP2T1P-201ENST00000432607 1285 ntBASIC32.26■■■□□ 2.75
SHANK2Q9UPX8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
SHANK2Q9UPX8 AC053503.5-201ENST00000601508 636 ntBASIC32.26■■■□□ 2.75
SHANK2Q9UPX8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
SHANK2Q9UPX8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SHANK2Q9UPX8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SHANK2Q9UPX8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SHANK2Q9UPX8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
SHANK2Q9UPX8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC32.25■■■□□ 2.75
SHANK2Q9UPX8 APTR-205ENST00000447009 902 ntTSL 2 BASIC32.25■■■□□ 2.75
SHANK2Q9UPX8 SLC7A5P1-201ENST00000568957 537 ntBASIC32.25■■■□□ 2.75
SHANK2Q9UPX8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC32.25■■■□□ 2.75
SHANK2Q9UPX8 AC013268.1-206ENST00000638368 961 ntBASIC32.25■■■□□ 2.75
SHANK2Q9UPX8 AC112229.1-201ENST00000639295 961 ntBASIC32.25■■■□□ 2.75
SHANK2Q9UPX8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
SHANK2Q9UPX8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC32.24■■■□□ 2.75
SHANK2Q9UPX8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC32.24■■■□□ 2.75
SHANK2Q9UPX8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC32.24■■■□□ 2.75
SHANK2Q9UPX8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC32.24■■■□□ 2.75
SHANK2Q9UPX8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
SHANK2Q9UPX8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC32.23■■■□□ 2.75
SHANK2Q9UPX8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC32.23■■■□□ 2.75
SHANK2Q9UPX8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC32.23■■■□□ 2.75
SHANK2Q9UPX8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
SHANK2Q9UPX8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
SHANK2Q9UPX8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC32.23■■■□□ 2.75
SHANK2Q9UPX8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
SHANK2Q9UPX8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC32.22■■■□□ 2.75
SHANK2Q9UPX8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
SHANK2Q9UPX8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
SHANK2Q9UPX8 AC093827.2-201ENST00000512654 315 ntBASIC32.22■■■□□ 2.75
SHANK2Q9UPX8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC32.22■■■□□ 2.75
SHANK2Q9UPX8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC32.22■■■□□ 2.75
SHANK2Q9UPX8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC32.21■■■□□ 2.75
SHANK2Q9UPX8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
SHANK2Q9UPX8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
SHANK2Q9UPX8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC32.21■■■□□ 2.75
SHANK2Q9UPX8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC32.21■■■□□ 2.75
SHANK2Q9UPX8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
SHANK2Q9UPX8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC32.21■■■□□ 2.75
SHANK2Q9UPX8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC32.21■■■□□ 2.75
SHANK2Q9UPX8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC32.21■■■□□ 2.75
SHANK2Q9UPX8 AC098934.4-201ENST00000564127 592 ntBASIC32.2■■■□□ 2.75
SHANK2Q9UPX8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC32.2■■■□□ 2.74
SHANK2Q9UPX8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC32.2■■■□□ 2.74
SHANK2Q9UPX8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
SHANK2Q9UPX8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
SHANK2Q9UPX8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
SHANK2Q9UPX8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
SHANK2Q9UPX8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
SHANK2Q9UPX8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC32.19■■■□□ 2.74
SHANK2Q9UPX8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC32.19■■■□□ 2.74
SHANK2Q9UPX8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC32.19■■■□□ 2.74
SHANK2Q9UPX8 AC133552.2-202ENST00000575694 574 ntBASIC32.19■■■□□ 2.74
SHANK2Q9UPX8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC32.19■■■□□ 2.74
SHANK2Q9UPX8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
SHANK2Q9UPX8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC32.19■■■□□ 2.74
SHANK2Q9UPX8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC32.19■■■□□ 2.74
SHANK2Q9UPX8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
SHANK2Q9UPX8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC32.18■■■□□ 2.74
SHANK2Q9UPX8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC32.18■■■□□ 2.74
SHANK2Q9UPX8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
SHANK2Q9UPX8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
SHANK2Q9UPX8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC32.18■■■□□ 2.74
SHANK2Q9UPX8 AC093323.1-202ENST00000635031 2045 ntBASIC32.18■■■□□ 2.74
SHANK2Q9UPX8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
SHANK2Q9UPX8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
SHANK2Q9UPX8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
SHANK2Q9UPX8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
SHANK2Q9UPX8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
SHANK2Q9UPX8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC32.17■■■□□ 2.74
SHANK2Q9UPX8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC32.17■■■□□ 2.74
SHANK2Q9UPX8 AL138781.1-201ENST00000566567 1274 ntBASIC32.17■■■□□ 2.74
SHANK2Q9UPX8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC32.17■■■□□ 2.74
SHANK2Q9UPX8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
SHANK2Q9UPX8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
SHANK2Q9UPX8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC32.17■■■□□ 2.74
SHANK2Q9UPX8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
SHANK2Q9UPX8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC32.17■■■□□ 2.74
SHANK2Q9UPX8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC32.16■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms