Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCKIPSDQ9NZQ3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCKIPSDQ9NZQ3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCKIPSDQ9NZQ3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCKIPSDQ9NZQ3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
NCKIPSDQ9NZQ3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCKIPSDQ9NZQ3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.66■■□□□ 1.06
NCKIPSDQ9NZQ3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
NCKIPSDQ9NZQ3 KRT18P5-201ENST00000436075 1291 ntBASIC21.66■■□□□ 1.06
NCKIPSDQ9NZQ3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.66■■□□□ 1.06
NCKIPSDQ9NZQ3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.66■■□□□ 1.06
NCKIPSDQ9NZQ3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.66■■□□□ 1.06
NCKIPSDQ9NZQ3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NCKIPSDQ9NZQ3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.66■■□□□ 1.06
NCKIPSDQ9NZQ3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
NCKIPSDQ9NZQ3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.66■■□□□ 1.06
NCKIPSDQ9NZQ3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NCKIPSDQ9NZQ3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCKIPSDQ9NZQ3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NCKIPSDQ9NZQ3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCKIPSDQ9NZQ3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCKIPSDQ9NZQ3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NCKIPSDQ9NZQ3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCKIPSDQ9NZQ3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCKIPSDQ9NZQ3 AC022517.1-201ENST00000592429 346 ntBASIC21.65■■□□□ 1.06
NCKIPSDQ9NZQ3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.65■■□□□ 1.06
NCKIPSDQ9NZQ3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCKIPSDQ9NZQ3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.65■■□□□ 1.06
NCKIPSDQ9NZQ3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NCKIPSDQ9NZQ3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCKIPSDQ9NZQ3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.64■■□□□ 1.06
NCKIPSDQ9NZQ3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NCKIPSDQ9NZQ3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.64■■□□□ 1.06
NCKIPSDQ9NZQ3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.64■■□□□ 1.06
NCKIPSDQ9NZQ3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.64■■□□□ 1.05
NCKIPSDQ9NZQ3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCKIPSDQ9NZQ3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NCKIPSDQ9NZQ3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.64■■□□□ 1.05
NCKIPSDQ9NZQ3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NCKIPSDQ9NZQ3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCKIPSDQ9NZQ3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.05
NCKIPSDQ9NZQ3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCKIPSDQ9NZQ3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCKIPSDQ9NZQ3 LINC02228-203ENST00000641970 1355 ntBASIC21.63■■□□□ 1.05
NCKIPSDQ9NZQ3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
NCKIPSDQ9NZQ3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NCKIPSDQ9NZQ3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
NCKIPSDQ9NZQ3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCKIPSDQ9NZQ3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.63■■□□□ 1.05
NCKIPSDQ9NZQ3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.63■■□□□ 1.05
NCKIPSDQ9NZQ3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
NCKIPSDQ9NZQ3 DUX4L2-201ENST00000561772 1275 ntBASIC21.63■■□□□ 1.05
NCKIPSDQ9NZQ3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.63■■□□□ 1.05
NCKIPSDQ9NZQ3 DUX4L6-201ENST00000626483 1275 ntBASIC21.63■■□□□ 1.05
NCKIPSDQ9NZQ3 DUX4L1-201ENST00000627662 1275 ntBASIC21.63■■□□□ 1.05
NCKIPSDQ9NZQ3 DUX4L8-201ENST00000629013 1275 ntBASIC21.63■■□□□ 1.05
NCKIPSDQ9NZQ3 DUX4L3-201ENST00000630187 1275 ntBASIC21.63■■□□□ 1.05
NCKIPSDQ9NZQ3 DUX4L7-201ENST00000630678 1275 ntBASIC21.63■■□□□ 1.05
NCKIPSDQ9NZQ3 DUX4L5-201ENST00000630834 1275 ntBASIC21.63■■□□□ 1.05
NCKIPSDQ9NZQ3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCKIPSDQ9NZQ3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.62■■□□□ 1.05
NCKIPSDQ9NZQ3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCKIPSDQ9NZQ3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.62■■□□□ 1.05
NCKIPSDQ9NZQ3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NCKIPSDQ9NZQ3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.62■■□□□ 1.05
NCKIPSDQ9NZQ3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCKIPSDQ9NZQ3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCKIPSDQ9NZQ3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NCKIPSDQ9NZQ3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.62■■□□□ 1.05
NCKIPSDQ9NZQ3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.62■■□□□ 1.05
NCKIPSDQ9NZQ3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
NCKIPSDQ9NZQ3 AC007375.3-201ENST00000600936 2314 ntBASIC21.62■■□□□ 1.05
NCKIPSDQ9NZQ3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCKIPSDQ9NZQ3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCKIPSDQ9NZQ3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCKIPSDQ9NZQ3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
NCKIPSDQ9NZQ3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.61■■□□□ 1.05
NCKIPSDQ9NZQ3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCKIPSDQ9NZQ3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCKIPSDQ9NZQ3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCKIPSDQ9NZQ3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.61■■□□□ 1.05
NCKIPSDQ9NZQ3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.61■■□□□ 1.05
NCKIPSDQ9NZQ3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.61■■□□□ 1.05
NCKIPSDQ9NZQ3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
NCKIPSDQ9NZQ3 AL031602.1-201ENST00000633169 911 ntBASIC21.61■■□□□ 1.05
NCKIPSDQ9NZQ3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCKIPSDQ9NZQ3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
NCKIPSDQ9NZQ3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
NCKIPSDQ9NZQ3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCKIPSDQ9NZQ3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCKIPSDQ9NZQ3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCKIPSDQ9NZQ3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NCKIPSDQ9NZQ3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.6■■□□□ 1.05
NCKIPSDQ9NZQ3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NCKIPSDQ9NZQ3 MIR6084-201ENST00000622012 110 ntBASIC21.6■■□□□ 1.05
NCKIPSDQ9NZQ3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NCKIPSDQ9NZQ3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
NCKIPSDQ9NZQ3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCKIPSDQ9NZQ3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.6■■□□□ 1.05
NCKIPSDQ9NZQ3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms