Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.11■■□□□ 1.29
CDH23Q9H251 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDH23Q9H251 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDH23Q9H251 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.1■■□□□ 1.29
CDH23Q9H251 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDH23Q9H251 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDH23Q9H251 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CDH23Q9H251 AC055733.4-201ENST00000638462 1354 ntBASIC23.1■■□□□ 1.29
CDH23Q9H251 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDH23Q9H251 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDH23Q9H251 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC23.1■■□□□ 1.29
CDH23Q9H251 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.1■■□□□ 1.29
CDH23Q9H251 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.1■■□□□ 1.29
CDH23Q9H251 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDH23Q9H251 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDH23Q9H251 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDH23Q9H251 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDH23Q9H251 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDH23Q9H251 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.09■■□□□ 1.29
CDH23Q9H251 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.09■■□□□ 1.29
CDH23Q9H251 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CDH23Q9H251 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.09■■□□□ 1.29
CDH23Q9H251 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDH23Q9H251 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.09■■□□□ 1.29
CDH23Q9H251 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDH23Q9H251 BX088651.1-201ENST00000540551 451 ntBASIC23.09■■□□□ 1.29
CDH23Q9H251 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
CDH23Q9H251 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC23.09■■□□□ 1.29
CDH23Q9H251 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.08■■□□□ 1.29
CDH23Q9H251 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDH23Q9H251 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.08■■□□□ 1.29
CDH23Q9H251 KRT18P21-201ENST00000515767 1272 ntBASIC23.08■■□□□ 1.29
CDH23Q9H251 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CDH23Q9H251 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CDH23Q9H251 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
CDH23Q9H251 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
CDH23Q9H251 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
CDH23Q9H251 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CDH23Q9H251 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CDH23Q9H251 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.08■■□□□ 1.28
CDH23Q9H251 AC009237.3-201ENST00000393279 1427 ntBASIC23.08■■□□□ 1.28
CDH23Q9H251 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
CDH23Q9H251 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDH23Q9H251 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.07■■□□□ 1.28
CDH23Q9H251 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.07■■□□□ 1.28
CDH23Q9H251 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.07■■□□□ 1.28
CDH23Q9H251 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.07■■□□□ 1.28
CDH23Q9H251 ABCB10P4-201ENST00000566803 2184 ntBASIC23.07■■□□□ 1.28
CDH23Q9H251 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CDH23Q9H251 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDH23Q9H251 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CDH23Q9H251 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CDH23Q9H251 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDH23Q9H251 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
CDH23Q9H251 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
CDH23Q9H251 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
CDH23Q9H251 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDH23Q9H251 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.06■■□□□ 1.28
CDH23Q9H251 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDH23Q9H251 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDH23Q9H251 DUSP8P3-201ENST00000399571 1760 ntBASIC23.06■■□□□ 1.28
CDH23Q9H251 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.06■■□□□ 1.28
CDH23Q9H251 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.06■■□□□ 1.28
CDH23Q9H251 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDH23Q9H251 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CDH23Q9H251 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDH23Q9H251 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CDH23Q9H251 BX276092.2-201ENST00000417668 665 ntBASIC23.06■■□□□ 1.28
CDH23Q9H251 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.06■■□□□ 1.28
CDH23Q9H251 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.06■■□□□ 1.28
CDH23Q9H251 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.05■■□□□ 1.28
CDH23Q9H251 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CDH23Q9H251 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.05■■□□□ 1.28
CDH23Q9H251 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDH23Q9H251 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.05■■□□□ 1.28
CDH23Q9H251 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDH23Q9H251 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDH23Q9H251 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
CDH23Q9H251 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.05■■□□□ 1.28
CDH23Q9H251 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CDH23Q9H251 AC008403.3-201ENST00000598924 454 ntBASIC23.05■■□□□ 1.28
CDH23Q9H251 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDH23Q9H251 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.05■■□□□ 1.28
CDH23Q9H251 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDH23Q9H251 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDH23Q9H251 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.05■■□□□ 1.28
CDH23Q9H251 UBE2SP1-201ENST00000450587 669 ntBASIC23.04■■□□□ 1.28
CDH23Q9H251 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.04■■□□□ 1.28
CDH23Q9H251 AP003097.1-201ENST00000530657 1135 ntBASIC23.04■■□□□ 1.28
CDH23Q9H251 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDH23Q9H251 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.04■■□□□ 1.28
CDH23Q9H251 OXCT2P1-201ENST00000447263 1535 ntBASIC23.04■■□□□ 1.28
CDH23Q9H251 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDH23Q9H251 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.04■■□□□ 1.28
CDH23Q9H251 TERF1P5-201ENST00000477545 1207 ntBASIC23.04■■□□□ 1.28
CDH23Q9H251 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.04■■□□□ 1.28
CDH23Q9H251 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CDH23Q9H251 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.04■■□□□ 1.28
CDH23Q9H251 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
CDH23Q9H251 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms