Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.24■□□□□ 0.83
COL21A1Q96P44 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
COL21A1Q96P44 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.24■□□□□ 0.83
COL21A1Q96P44 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
COL21A1Q96P44 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL21A1Q96P44 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.23■□□□□ 0.83
COL21A1Q96P44 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL21A1Q96P44 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL21A1Q96P44 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.23■□□□□ 0.83
COL21A1Q96P44 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL21A1Q96P44 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
COL21A1Q96P44 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.23■□□□□ 0.83
COL21A1Q96P44 MIR638-201ENST00000385237 100 ntBASIC20.23■□□□□ 0.83
COL21A1Q96P44 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COL21A1Q96P44 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.23■□□□□ 0.83
COL21A1Q96P44 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.23■□□□□ 0.83
COL21A1Q96P44 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.23■□□□□ 0.83
COL21A1Q96P44 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COL21A1Q96P44 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL21A1Q96P44 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
COL21A1Q96P44 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL21A1Q96P44 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL21A1Q96P44 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL21A1Q96P44 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.22■□□□□ 0.83
COL21A1Q96P44 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL21A1Q96P44 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL21A1Q96P44 AP001330.3-201ENST00000520123 633 ntBASIC20.22■□□□□ 0.83
COL21A1Q96P44 AC008764.7-201ENST00000593779 1081 ntBASIC20.22■□□□□ 0.83
COL21A1Q96P44 AC005837.3-201ENST00000612163 286 ntBASIC20.22■□□□□ 0.83
COL21A1Q96P44 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL21A1Q96P44 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL21A1Q96P44 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.22■□□□□ 0.83
COL21A1Q96P44 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.22■□□□□ 0.83
COL21A1Q96P44 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL21A1Q96P44 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL21A1Q96P44 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.21■□□□□ 0.83
COL21A1Q96P44 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
COL21A1Q96P44 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.21■□□□□ 0.83
COL21A1Q96P44 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.21■□□□□ 0.83
COL21A1Q96P44 AC027682.1-201ENST00000562846 899 ntBASIC20.21■□□□□ 0.83
COL21A1Q96P44 AL031432.3-201ENST00000607698 485 ntBASIC20.21■□□□□ 0.83
COL21A1Q96P44 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.21■□□□□ 0.83
COL21A1Q96P44 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
COL21A1Q96P44 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
COL21A1Q96P44 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
COL21A1Q96P44 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL21A1Q96P44 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL21A1Q96P44 AF213884.3-201ENST00000563833 479 ntBASIC20.2■□□□□ 0.82
COL21A1Q96P44 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL21A1Q96P44 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.2■□□□□ 0.82
COL21A1Q96P44 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL21A1Q96P44 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
COL21A1Q96P44 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
COL21A1Q96P44 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL21A1Q96P44 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL21A1Q96P44 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL21A1Q96P44 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL21A1Q96P44 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.19■□□□□ 0.82
COL21A1Q96P44 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL21A1Q96P44 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.19■□□□□ 0.82
COL21A1Q96P44 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL21A1Q96P44 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL21A1Q96P44 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL21A1Q96P44 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
COL21A1Q96P44 MIR939-201ENST00000401314 82 ntBASIC20.19■□□□□ 0.82
COL21A1Q96P44 SUDS3P1-201ENST00000505831 966 ntBASIC20.19■□□□□ 0.82
COL21A1Q96P44 AC142381.2-201ENST00000566120 298 ntBASIC20.19■□□□□ 0.82
COL21A1Q96P44 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.19■□□□□ 0.82
COL21A1Q96P44 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL21A1Q96P44 AC068587.7-201ENST00000641602 218 ntBASIC20.19■□□□□ 0.82
COL21A1Q96P44 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL21A1Q96P44 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL21A1Q96P44 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL21A1Q96P44 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
COL21A1Q96P44 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.18■□□□□ 0.82
COL21A1Q96P44 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
COL21A1Q96P44 AC010542.4-201ENST00000563151 1910 ntBASIC20.18■□□□□ 0.82
COL21A1Q96P44 AC099791.1-201ENST00000416440 715 ntBASIC20.18■□□□□ 0.82
COL21A1Q96P44 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.18■□□□□ 0.82
COL21A1Q96P44 AC091305.1-201ENST00000479476 895 ntBASIC20.18■□□□□ 0.82
COL21A1Q96P44 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.18■□□□□ 0.82
COL21A1Q96P44 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.18■□□□□ 0.82
COL21A1Q96P44 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.18■□□□□ 0.82
COL21A1Q96P44 AL136967.2-201ENST00000623968 743 ntBASIC20.18■□□□□ 0.82
COL21A1Q96P44 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL21A1Q96P44 AL031602.1-201ENST00000633169 911 ntBASIC20.18■□□□□ 0.82
COL21A1Q96P44 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL21A1Q96P44 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL21A1Q96P44 SLC25A24-204ENST00000569674 2357 ntBASIC20.17■□□□□ 0.82
COL21A1Q96P44 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL21A1Q96P44 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.17■□□□□ 0.82
COL21A1Q96P44 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
COL21A1Q96P44 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
COL21A1Q96P44 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL21A1Q96P44 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL21A1Q96P44 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
COL21A1Q96P44 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL21A1Q96P44 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.17■□□□□ 0.82
COL21A1Q96P44 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL21A1Q96P44 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms