Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SPG11Q96JI7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.33■□□□□ 0.53
SPG11Q96JI7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.33■□□□□ 0.53
SPG11Q96JI7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.33■□□□□ 0.53
SPG11Q96JI7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.33■□□□□ 0.53
SPG11Q96JI7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SPG11Q96JI7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPG11Q96JI7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SPG11Q96JI7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SPG11Q96JI7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.33■□□□□ 0.52
SPG11Q96JI7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.33■□□□□ 0.52
SPG11Q96JI7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.33■□□□□ 0.52
SPG11Q96JI7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.33■□□□□ 0.52
SPG11Q96JI7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPG11Q96JI7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.33■□□□□ 0.52
SPG11Q96JI7 AC008694.1-202ENST00000636953 945 ntBASIC18.33■□□□□ 0.52
SPG11Q96JI7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPG11Q96JI7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPG11Q96JI7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SPG11Q96JI7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.32■□□□□ 0.52
SPG11Q96JI7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
SPG11Q96JI7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPG11Q96JI7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SPG11Q96JI7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SPG11Q96JI7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SPG11Q96JI7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPG11Q96JI7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SPG11Q96JI7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SPG11Q96JI7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.32■□□□□ 0.52
SPG11Q96JI7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SPG11Q96JI7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.32■□□□□ 0.52
SPG11Q96JI7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPG11Q96JI7 AC138907.5-202ENST00000569484 235 ntBASIC18.32■□□□□ 0.52
SPG11Q96JI7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPG11Q96JI7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPG11Q96JI7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPG11Q96JI7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.31■□□□□ 0.52
SPG11Q96JI7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SPG11Q96JI7 RARRES2P4-201ENST00000514074 484 ntBASIC18.31■□□□□ 0.52
SPG11Q96JI7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.31■□□□□ 0.52
SPG11Q96JI7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.31■□□□□ 0.52
SPG11Q96JI7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.31■□□□□ 0.52
SPG11Q96JI7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPG11Q96JI7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SPG11Q96JI7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPG11Q96JI7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPG11Q96JI7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SPG11Q96JI7 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.31■□□□□ 0.52
SPG11Q96JI7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SPG11Q96JI7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.31■□□□□ 0.52
SPG11Q96JI7 AL512625.2-201ENST00000417533 625 ntBASIC18.31■□□□□ 0.52
SPG11Q96JI7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.31■□□□□ 0.52
SPG11Q96JI7 AC007322.4-201ENST00000509611 723 ntBASIC18.31■□□□□ 0.52
SPG11Q96JI7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.31■□□□□ 0.52
SPG11Q96JI7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.31■□□□□ 0.52
SPG11Q96JI7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPG11Q96JI7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPG11Q96JI7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.3■□□□□ 0.52
SPG11Q96JI7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.3■□□□□ 0.52
SPG11Q96JI7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPG11Q96JI7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPG11Q96JI7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.3■□□□□ 0.52
SPG11Q96JI7 BX276092.2-201ENST00000417668 665 ntBASIC18.3■□□□□ 0.52
SPG11Q96JI7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SPG11Q96JI7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
SPG11Q96JI7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.3■□□□□ 0.52
SPG11Q96JI7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.3■□□□□ 0.52
SPG11Q96JI7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPG11Q96JI7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPG11Q96JI7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.29■□□□□ 0.52
SPG11Q96JI7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.29■□□□□ 0.52
SPG11Q96JI7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SPG11Q96JI7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SPG11Q96JI7 CYP2T1P-201ENST00000432607 1285 ntBASIC18.29■□□□□ 0.52
SPG11Q96JI7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.29■□□□□ 0.52
SPG11Q96JI7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.29■□□□□ 0.52
SPG11Q96JI7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SPG11Q96JI7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SPG11Q96JI7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SPG11Q96JI7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
SPG11Q96JI7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SPG11Q96JI7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPG11Q96JI7 DUSP8P3-201ENST00000399571 1760 ntBASIC18.29■□□□□ 0.52
SPG11Q96JI7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SPG11Q96JI7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.29■□□□□ 0.52
SPG11Q96JI7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.29■□□□□ 0.52
SPG11Q96JI7 AC091874.3-201ENST00000512672 1195 ntBASIC18.29■□□□□ 0.52
SPG11Q96JI7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.29■□□□□ 0.52
SPG11Q96JI7 OR10C1-204ENST00000622521 1039 ntBASIC18.29■□□□□ 0.52
SPG11Q96JI7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.29■□□□□ 0.52
SPG11Q96JI7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPG11Q96JI7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SPG11Q96JI7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SPG11Q96JI7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPG11Q96JI7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.28■□□□□ 0.52
SPG11Q96JI7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.28■□□□□ 0.52
SPG11Q96JI7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.28■□□□□ 0.52
SPG11Q96JI7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SPG11Q96JI7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.28■□□□□ 0.52
SPG11Q96JI7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms