Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NAF1Q96HR8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NAF1Q96HR8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NAF1Q96HR8 AC026310.3-201ENST00000625186 2373 ntBASIC21.54■■□□□ 1.04
NAF1Q96HR8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
NAF1Q96HR8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
NAF1Q96HR8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
NAF1Q96HR8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
NAF1Q96HR8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NAF1Q96HR8 YBX1P1-201ENST00000445822 960 ntBASIC21.54■■□□□ 1.04
NAF1Q96HR8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.54■■□□□ 1.04
NAF1Q96HR8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.54■■□□□ 1.04
NAF1Q96HR8 AC009086.3-201ENST00000623486 1008 ntBASIC21.54■■□□□ 1.04
NAF1Q96HR8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NAF1Q96HR8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.54■■□□□ 1.04
NAF1Q96HR8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.54■■□□□ 1.04
NAF1Q96HR8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.54■■□□□ 1.04
NAF1Q96HR8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.54■■□□□ 1.04
NAF1Q96HR8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NAF1Q96HR8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NAF1Q96HR8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
NAF1Q96HR8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NAF1Q96HR8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.53■■□□□ 1.04
NAF1Q96HR8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NAF1Q96HR8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NAF1Q96HR8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.53■■□□□ 1.04
NAF1Q96HR8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.53■■□□□ 1.04
NAF1Q96HR8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
NAF1Q96HR8 AC241377.3-202ENST00000626088 1088 ntBASIC21.53■■□□□ 1.04
NAF1Q96HR8 AC241585.3-202ENST00000628937 1088 ntBASIC21.53■■□□□ 1.04
NAF1Q96HR8 AC245100.8-202ENST00000629247 1058 ntBASIC21.53■■□□□ 1.04
NAF1Q96HR8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
NAF1Q96HR8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NAF1Q96HR8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NAF1Q96HR8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NAF1Q96HR8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
NAF1Q96HR8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NAF1Q96HR8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.53■■□□□ 1.04
NAF1Q96HR8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
NAF1Q96HR8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NAF1Q96HR8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
NAF1Q96HR8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NAF1Q96HR8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NAF1Q96HR8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NAF1Q96HR8 C17orf82-201ENST00000623772 1530 ntBASIC21.52■■□□□ 1.04
NAF1Q96HR8 ID1-201ENST00000376105 1233 ntBASIC21.52■■□□□ 1.04
NAF1Q96HR8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.52■■□□□ 1.04
NAF1Q96HR8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.52■■□□□ 1.04
NAF1Q96HR8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NAF1Q96HR8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.52■■□□□ 1.04
NAF1Q96HR8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
NAF1Q96HR8 DUX4L2-201ENST00000561772 1275 ntBASIC21.52■■□□□ 1.04
NAF1Q96HR8 MIR3181-201ENST00000578512 73 ntBASIC21.52■■□□□ 1.04
NAF1Q96HR8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.52■■□□□ 1.04
NAF1Q96HR8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.52■■□□□ 1.04
NAF1Q96HR8 DUX4L6-201ENST00000626483 1275 ntBASIC21.52■■□□□ 1.04
NAF1Q96HR8 DUX4L1-201ENST00000627662 1275 ntBASIC21.52■■□□□ 1.04
NAF1Q96HR8 DUX4L8-201ENST00000629013 1275 ntBASIC21.52■■□□□ 1.04
NAF1Q96HR8 DUX4L3-201ENST00000630187 1275 ntBASIC21.52■■□□□ 1.04
NAF1Q96HR8 DUX4L7-201ENST00000630678 1275 ntBASIC21.52■■□□□ 1.04
NAF1Q96HR8 DUX4L5-201ENST00000630834 1275 ntBASIC21.52■■□□□ 1.04
NAF1Q96HR8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
NAF1Q96HR8 C11orf96-202ENST00000528572 1834 ntBASIC21.52■■□□□ 1.04
NAF1Q96HR8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.52■■□□□ 1.03
NAF1Q96HR8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NAF1Q96HR8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NAF1Q96HR8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
NAF1Q96HR8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NAF1Q96HR8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
NAF1Q96HR8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.51■■□□□ 1.03
NAF1Q96HR8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NAF1Q96HR8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
NAF1Q96HR8 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.51■■□□□ 1.03
NAF1Q96HR8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.51■■□□□ 1.03
NAF1Q96HR8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.51■■□□□ 1.03
NAF1Q96HR8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.51■■□□□ 1.03
NAF1Q96HR8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.51■■□□□ 1.03
NAF1Q96HR8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NAF1Q96HR8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
NAF1Q96HR8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.51■■□□□ 1.03
NAF1Q96HR8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NAF1Q96HR8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NAF1Q96HR8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
NAF1Q96HR8 TSPY26P-201ENST00000476365 1326 ntBASIC21.51■■□□□ 1.03
NAF1Q96HR8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NAF1Q96HR8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
NAF1Q96HR8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
NAF1Q96HR8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NAF1Q96HR8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NAF1Q96HR8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NAF1Q96HR8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NAF1Q96HR8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NAF1Q96HR8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
NAF1Q96HR8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.5■■□□□ 1.03
NAF1Q96HR8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NAF1Q96HR8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NAF1Q96HR8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NAF1Q96HR8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.5■■□□□ 1.03
NAF1Q96HR8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.5■■□□□ 1.03
NAF1Q96HR8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms