Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 UNC93B3-201ENST00000308076 687 ntBASIC22.71■■□□□ 1.23
TRIM11Q96F44 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.71■■□□□ 1.23
TRIM11Q96F44 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.71■■□□□ 1.23
TRIM11Q96F44 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.71■■□□□ 1.23
TRIM11Q96F44 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM11Q96F44 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM11Q96F44 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM11Q96F44 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM11Q96F44 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
TRIM11Q96F44 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
TRIM11Q96F44 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.7■■□□□ 1.23
TRIM11Q96F44 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM11Q96F44 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
TRIM11Q96F44 MIR4767-201ENST00000582827 78 ntBASIC22.7■■□□□ 1.22
TRIM11Q96F44 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM11Q96F44 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM11Q96F44 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.7■■□□□ 1.22
TRIM11Q96F44 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
TRIM11Q96F44 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.7■■□□□ 1.22
TRIM11Q96F44 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
TRIM11Q96F44 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.69■■□□□ 1.22
TRIM11Q96F44 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.69■■□□□ 1.22
TRIM11Q96F44 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
TRIM11Q96F44 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.69■■□□□ 1.22
TRIM11Q96F44 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.69■■□□□ 1.22
TRIM11Q96F44 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRIM11Q96F44 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRIM11Q96F44 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM11Q96F44 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM11Q96F44 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM11Q96F44 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM11Q96F44 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM11Q96F44 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM11Q96F44 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.68■■□□□ 1.22
TRIM11Q96F44 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.68■■□□□ 1.22
TRIM11Q96F44 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM11Q96F44 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.68■■□□□ 1.22
TRIM11Q96F44 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.68■■□□□ 1.22
TRIM11Q96F44 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.68■■□□□ 1.22
TRIM11Q96F44 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM11Q96F44 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM11Q96F44 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM11Q96F44 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM11Q96F44 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.68■■□□□ 1.22
TRIM11Q96F44 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
TRIM11Q96F44 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM11Q96F44 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM11Q96F44 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM11Q96F44 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM11Q96F44 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM11Q96F44 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.67■■□□□ 1.22
TRIM11Q96F44 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.67■■□□□ 1.22
TRIM11Q96F44 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
TRIM11Q96F44 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
TRIM11Q96F44 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
TRIM11Q96F44 AL136162.1-201ENST00000607711 1078 ntBASIC22.67■■□□□ 1.22
TRIM11Q96F44 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.67■■□□□ 1.22
TRIM11Q96F44 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM11Q96F44 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
TRIM11Q96F44 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.66■■□□□ 1.22
TRIM11Q96F44 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.66■■□□□ 1.22
TRIM11Q96F44 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.66■■□□□ 1.22
TRIM11Q96F44 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM11Q96F44 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM11Q96F44 AP004607.7-201ENST00000527152 1677 ntBASIC22.66■■□□□ 1.22
TRIM11Q96F44 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM11Q96F44 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
TRIM11Q96F44 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM11Q96F44 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM11Q96F44 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.66■■□□□ 1.22
TRIM11Q96F44 AC233992.3-201ENST00000607491 485 ntBASIC22.66■■□□□ 1.22
TRIM11Q96F44 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM11Q96F44 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM11Q96F44 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM11Q96F44 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
TRIM11Q96F44 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM11Q96F44 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM11Q96F44 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM11Q96F44 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM11Q96F44 AC135279.3-201ENST00000610945 1311 ntBASIC22.65■■□□□ 1.22
TRIM11Q96F44 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM11Q96F44 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM11Q96F44 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM11Q96F44 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM11Q96F44 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.65■■□□□ 1.22
TRIM11Q96F44 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.65■■□□□ 1.22
TRIM11Q96F44 AC024257.2-201ENST00000549699 147 ntBASIC22.65■■□□□ 1.22
TRIM11Q96F44 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM11Q96F44 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM11Q96F44 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM11Q96F44 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.65■■□□□ 1.22
TRIM11Q96F44 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM11Q96F44 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.65■■□□□ 1.22
TRIM11Q96F44 AC026471.6-201ENST00000622954 1905 ntBASIC22.65■■□□□ 1.22
TRIM11Q96F44 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.65■■□□□ 1.22
TRIM11Q96F44 AC008406.3-201ENST00000620001 1374 ntBASIC22.64■■□□□ 1.22
TRIM11Q96F44 AC026310.3-201ENST00000625186 2373 ntBASIC22.64■■□□□ 1.22
TRIM11Q96F44 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TRIM11Q96F44 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TRIM11Q96F44 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms