Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb17Q91VD8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb17Q91VD8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pcdhb17Q91VD8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Pcdhb17Q91VD8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb17Q91VD8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb17Q91VD8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdhb17Q91VD8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb17Q91VD8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb17Q91VD8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.62■□□□□ 0.73
Pcdhb17Q91VD8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb17Q91VD8 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdhb17Q91VD8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Pcdhb17Q91VD8 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.62■□□□□ 0.73
Pcdhb17Q91VD8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pcdhb17Q91VD8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb17Q91VD8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb17Q91VD8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb17Q91VD8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb17Q91VD8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb17Q91VD8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb17Q91VD8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb17Q91VD8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhb17Q91VD8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb17Q91VD8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb17Q91VD8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb17Q91VD8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdhb17Q91VD8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb17Q91VD8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.61■□□□□ 0.73
Pcdhb17Q91VD8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Pcdhb17Q91VD8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb17Q91VD8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhb17Q91VD8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhb17Q91VD8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb17Q91VD8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb17Q91VD8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Pcdhb17Q91VD8 Gm42569-201ENSMUST00000200539 472 ntBASIC19.6■□□□□ 0.73
Pcdhb17Q91VD8 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.6■□□□□ 0.73
Pcdhb17Q91VD8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb17Q91VD8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb17Q91VD8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb17Q91VD8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb17Q91VD8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb17Q91VD8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb17Q91VD8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb17Q91VD8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb17Q91VD8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb17Q91VD8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb17Q91VD8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.59■□□□□ 0.73
Pcdhb17Q91VD8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb17Q91VD8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb17Q91VD8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb17Q91VD8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb17Q91VD8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb17Q91VD8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb17Q91VD8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.73
Pcdhb17Q91VD8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Pcdhb17Q91VD8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.58■□□□□ 0.72
Pcdhb17Q91VD8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
Pcdhb17Q91VD8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.58■□□□□ 0.72
Pcdhb17Q91VD8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb17Q91VD8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb17Q91VD8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb17Q91VD8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb17Q91VD8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb17Q91VD8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb17Q91VD8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb17Q91VD8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.57■□□□□ 0.72
Pcdhb17Q91VD8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb17Q91VD8 Gm27405-201ENSMUST00000184201 112 ntBASIC19.57■□□□□ 0.72
Pcdhb17Q91VD8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.57■□□□□ 0.72
Pcdhb17Q91VD8 Gm43416-201ENSMUST00000201916 1015 ntBASIC19.57■□□□□ 0.72
Pcdhb17Q91VD8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb17Q91VD8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Pcdhb17Q91VD8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Pcdhb17Q91VD8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb17Q91VD8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb17Q91VD8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb17Q91VD8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Pcdhb17Q91VD8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.56■□□□□ 0.72
Pcdhb17Q91VD8 Gm44882-201ENSMUST00000205702 802 ntBASIC19.56■□□□□ 0.72
Pcdhb17Q91VD8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb17Q91VD8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb17Q91VD8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb17Q91VD8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb17Q91VD8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb17Q91VD8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.55■□□□□ 0.72
Pcdhb17Q91VD8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb17Q91VD8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb17Q91VD8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pcdhb17Q91VD8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb17Q91VD8 Gm7291-201ENSMUST00000199147 382 ntBASIC19.55■□□□□ 0.72
Pcdhb17Q91VD8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb17Q91VD8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb17Q91VD8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb17Q91VD8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb17Q91VD8 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.55■□□□□ 0.72
Pcdhb17Q91VD8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb17Q91VD8 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.54■□□□□ 0.72
Pcdhb17Q91VD8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms