Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.86■■□□□ 1.25
TTC39CQ8N584 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
TTC39CQ8N584 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
TTC39CQ8N584 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TTC39CQ8N584 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.86■■□□□ 1.25
TTC39CQ8N584 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.86■■□□□ 1.25
TTC39CQ8N584 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.86■■□□□ 1.25
TTC39CQ8N584 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.86■■□□□ 1.25
TTC39CQ8N584 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.86■■□□□ 1.25
TTC39CQ8N584 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.86■■□□□ 1.25
TTC39CQ8N584 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TTC39CQ8N584 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TTC39CQ8N584 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TTC39CQ8N584 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TTC39CQ8N584 C11orf96-202ENST00000528572 1834 ntBASIC22.85■■□□□ 1.25
TTC39CQ8N584 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TTC39CQ8N584 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.85■■□□□ 1.25
TTC39CQ8N584 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.85■■□□□ 1.25
TTC39CQ8N584 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.85■■□□□ 1.25
TTC39CQ8N584 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.85■■□□□ 1.25
TTC39CQ8N584 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
TTC39CQ8N584 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TTC39CQ8N584 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TTC39CQ8N584 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TTC39CQ8N584 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TTC39CQ8N584 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TTC39CQ8N584 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TTC39CQ8N584 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TTC39CQ8N584 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TTC39CQ8N584 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
TTC39CQ8N584 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
TTC39CQ8N584 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TTC39CQ8N584 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TTC39CQ8N584 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.84■■□□□ 1.25
TTC39CQ8N584 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TTC39CQ8N584 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.84■■□□□ 1.25
TTC39CQ8N584 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TTC39CQ8N584 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.84■■□□□ 1.25
TTC39CQ8N584 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.84■■□□□ 1.25
TTC39CQ8N584 AC055733.4-201ENST00000638462 1354 ntBASIC22.84■■□□□ 1.25
TTC39CQ8N584 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TTC39CQ8N584 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TTC39CQ8N584 FAM99A-202ENST00000538190 1989 ntBASIC22.83■■□□□ 1.25
TTC39CQ8N584 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
TTC39CQ8N584 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TTC39CQ8N584 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.83■■□□□ 1.25
TTC39CQ8N584 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.83■■□□□ 1.25
TTC39CQ8N584 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
TTC39CQ8N584 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TTC39CQ8N584 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
TTC39CQ8N584 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TTC39CQ8N584 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.24
TTC39CQ8N584 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
TTC39CQ8N584 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.82■■□□□ 1.24
TTC39CQ8N584 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TTC39CQ8N584 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
TTC39CQ8N584 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TTC39CQ8N584 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TTC39CQ8N584 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.82■■□□□ 1.24
TTC39CQ8N584 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.82■■□□□ 1.24
TTC39CQ8N584 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
TTC39CQ8N584 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.82■■□□□ 1.24
TTC39CQ8N584 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TTC39CQ8N584 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.82■■□□□ 1.24
TTC39CQ8N584 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TTC39CQ8N584 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TTC39CQ8N584 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.81■■□□□ 1.24
TTC39CQ8N584 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.81■■□□□ 1.24
TTC39CQ8N584 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TTC39CQ8N584 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.81■■□□□ 1.24
TTC39CQ8N584 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.81■■□□□ 1.24
TTC39CQ8N584 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.81■■□□□ 1.24
TTC39CQ8N584 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TTC39CQ8N584 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.81■■□□□ 1.24
TTC39CQ8N584 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TTC39CQ8N584 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TTC39CQ8N584 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.81■■□□□ 1.24
TTC39CQ8N584 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TTC39CQ8N584 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.8■■□□□ 1.24
TTC39CQ8N584 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TTC39CQ8N584 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TTC39CQ8N584 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TTC39CQ8N584 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.8■■□□□ 1.24
TTC39CQ8N584 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.8■■□□□ 1.24
TTC39CQ8N584 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.8■■□□□ 1.24
TTC39CQ8N584 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
TTC39CQ8N584 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.8■■□□□ 1.24
TTC39CQ8N584 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.8■■□□□ 1.24
TTC39CQ8N584 AC079834.2-201ENST00000609776 1949 ntBASIC22.8■■□□□ 1.24
TTC39CQ8N584 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TTC39CQ8N584 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
TTC39CQ8N584 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TTC39CQ8N584 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
TTC39CQ8N584 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.79■■□□□ 1.24
TTC39CQ8N584 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TTC39CQ8N584 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
TTC39CQ8N584 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
TTC39CQ8N584 AC097381.1-201ENST00000429019 1296 ntBASIC22.79■■□□□ 1.24
TTC39CQ8N584 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.79■■□□□ 1.24
TTC39CQ8N584 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms