Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 TERF1P2-201ENST00000583350 1212 ntBASIC23.05■■□□□ 1.28
CCDC105Q8IYK2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC105Q8IYK2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC105Q8IYK2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC105Q8IYK2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.04■■□□□ 1.28
CCDC105Q8IYK2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC105Q8IYK2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC105Q8IYK2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC105Q8IYK2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC105Q8IYK2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC105Q8IYK2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC105Q8IYK2 AC080038.1-201ENST00000611274 1154 ntBASIC23.04■■□□□ 1.28
CCDC105Q8IYK2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC105Q8IYK2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.04■■□□□ 1.28
CCDC105Q8IYK2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC105Q8IYK2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.04■■□□□ 1.28
CCDC105Q8IYK2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC105Q8IYK2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.03■■□□□ 1.28
CCDC105Q8IYK2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC105Q8IYK2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC105Q8IYK2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC105Q8IYK2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC105Q8IYK2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC105Q8IYK2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC105Q8IYK2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC105Q8IYK2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.03■■□□□ 1.28
CCDC105Q8IYK2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.03■■□□□ 1.28
CCDC105Q8IYK2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
CCDC105Q8IYK2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC105Q8IYK2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC105Q8IYK2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC105Q8IYK2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
CCDC105Q8IYK2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CCDC105Q8IYK2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.02■■□□□ 1.28
CCDC105Q8IYK2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.02■■□□□ 1.28
CCDC105Q8IYK2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.02■■□□□ 1.28
CCDC105Q8IYK2 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.02■■□□□ 1.28
CCDC105Q8IYK2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.02■■□□□ 1.28
CCDC105Q8IYK2 AC092053.2-201ENST00000640557 1818 ntBASIC23.02■■□□□ 1.28
CCDC105Q8IYK2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC105Q8IYK2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC105Q8IYK2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC105Q8IYK2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.27
CCDC105Q8IYK2 LINC02228-203ENST00000641970 1355 ntBASIC23.01■■□□□ 1.27
CCDC105Q8IYK2 AC139530.1-201ENST00000575312 1977 ntBASIC23.01■■□□□ 1.27
CCDC105Q8IYK2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC105Q8IYK2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
CCDC105Q8IYK2 AC144652.1-201ENST00000609974 1624 ntBASIC23.01■■□□□ 1.27
CCDC105Q8IYK2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
CCDC105Q8IYK2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
CCDC105Q8IYK2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC105Q8IYK2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
CCDC105Q8IYK2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.01■■□□□ 1.27
CCDC105Q8IYK2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC105Q8IYK2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC105Q8IYK2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC105Q8IYK2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC105Q8IYK2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC105Q8IYK2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC105Q8IYK2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC105Q8IYK2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC105Q8IYK2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.01■■□□□ 1.27
CCDC105Q8IYK2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCDC105Q8IYK2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23■■□□□ 1.27
CCDC105Q8IYK2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCDC105Q8IYK2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC105Q8IYK2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC105Q8IYK2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23■■□□□ 1.27
CCDC105Q8IYK2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCDC105Q8IYK2 AC007375.3-201ENST00000600936 2314 ntBASIC23■■□□□ 1.27
CCDC105Q8IYK2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCDC105Q8IYK2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC105Q8IYK2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23■■□□□ 1.27
CCDC105Q8IYK2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC105Q8IYK2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC105Q8IYK2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC105Q8IYK2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.99■■□□□ 1.27
CCDC105Q8IYK2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC105Q8IYK2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.99■■□□□ 1.27
CCDC105Q8IYK2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC105Q8IYK2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
CCDC105Q8IYK2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.99■■□□□ 1.27
CCDC105Q8IYK2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.99■■□□□ 1.27
CCDC105Q8IYK2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC105Q8IYK2 RAP2CP1-201ENST00000605103 478 ntBASIC22.99■■□□□ 1.27
CCDC105Q8IYK2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC105Q8IYK2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
CCDC105Q8IYK2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.99■■□□□ 1.27
CCDC105Q8IYK2 AC080038.3-201ENST00000623346 1952 ntBASIC22.99■■□□□ 1.27
CCDC105Q8IYK2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC105Q8IYK2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC105Q8IYK2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
CCDC105Q8IYK2 C11orf96-202ENST00000528572 1834 ntBASIC22.98■■□□□ 1.27
CCDC105Q8IYK2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC105Q8IYK2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.98■■□□□ 1.27
CCDC105Q8IYK2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
CCDC105Q8IYK2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.98■■□□□ 1.27
CCDC105Q8IYK2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC105Q8IYK2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.98■■□□□ 1.27
CCDC105Q8IYK2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms