Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
ZC3H3Q8IXZ2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
ZC3H3Q8IXZ2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
ZC3H3Q8IXZ2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
ZC3H3Q8IXZ2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
ZC3H3Q8IXZ2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
ZC3H3Q8IXZ2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.44■■□□□ 1.34
ZC3H3Q8IXZ2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.44■■□□□ 1.34
ZC3H3Q8IXZ2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
ZC3H3Q8IXZ2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.44■■□□□ 1.34
ZC3H3Q8IXZ2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
ZC3H3Q8IXZ2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
ZC3H3Q8IXZ2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.44■■□□□ 1.34
ZC3H3Q8IXZ2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
ZC3H3Q8IXZ2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
ZC3H3Q8IXZ2 MIR939-201ENST00000401314 82 ntBASIC23.44■■□□□ 1.34
ZC3H3Q8IXZ2 AC008764.7-201ENST00000593779 1081 ntBASIC23.44■■□□□ 1.34
ZC3H3Q8IXZ2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
ZC3H3Q8IXZ2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
ZC3H3Q8IXZ2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.43■■□□□ 1.34
ZC3H3Q8IXZ2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.43■■□□□ 1.34
ZC3H3Q8IXZ2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
ZC3H3Q8IXZ2 AC126544.1-201ENST00000580842 1059 ntBASIC23.43■■□□□ 1.34
ZC3H3Q8IXZ2 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.43■■□□□ 1.34
ZC3H3Q8IXZ2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
ZC3H3Q8IXZ2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
ZC3H3Q8IXZ2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.43■■□□□ 1.34
ZC3H3Q8IXZ2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
ZC3H3Q8IXZ2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
ZC3H3Q8IXZ2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
ZC3H3Q8IXZ2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
ZC3H3Q8IXZ2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.43■■□□□ 1.34
ZC3H3Q8IXZ2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
ZC3H3Q8IXZ2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
ZC3H3Q8IXZ2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
ZC3H3Q8IXZ2 AC019069.1-201ENST00000610008 1333 ntBASIC23.42■■□□□ 1.34
ZC3H3Q8IXZ2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.42■■□□□ 1.34
ZC3H3Q8IXZ2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.42■■□□□ 1.34
ZC3H3Q8IXZ2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.42■■□□□ 1.34
ZC3H3Q8IXZ2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
ZC3H3Q8IXZ2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.42■■□□□ 1.34
ZC3H3Q8IXZ2 AL355001.2-201ENST00000620617 1191 ntBASIC23.42■■□□□ 1.34
ZC3H3Q8IXZ2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
ZC3H3Q8IXZ2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ZC3H3Q8IXZ2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
ZC3H3Q8IXZ2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.41■■□□□ 1.34
ZC3H3Q8IXZ2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.41■■□□□ 1.34
ZC3H3Q8IXZ2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.41■■□□□ 1.34
ZC3H3Q8IXZ2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.41■■□□□ 1.34
ZC3H3Q8IXZ2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ZC3H3Q8IXZ2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ZC3H3Q8IXZ2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.41■■□□□ 1.34
ZC3H3Q8IXZ2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ZC3H3Q8IXZ2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.4■■□□□ 1.34
ZC3H3Q8IXZ2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
ZC3H3Q8IXZ2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
ZC3H3Q8IXZ2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ZC3H3Q8IXZ2 AP006587.3-201ENST00000525742 1516 ntBASIC23.4■■□□□ 1.34
ZC3H3Q8IXZ2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
ZC3H3Q8IXZ2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
ZC3H3Q8IXZ2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
ZC3H3Q8IXZ2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
ZC3H3Q8IXZ2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.4■■□□□ 1.34
ZC3H3Q8IXZ2 AL136967.2-201ENST00000623968 743 ntBASIC23.4■■□□□ 1.34
ZC3H3Q8IXZ2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.4■■□□□ 1.34
ZC3H3Q8IXZ2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
ZC3H3Q8IXZ2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
ZC3H3Q8IXZ2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
ZC3H3Q8IXZ2 AC003102.1-202ENST00000563394 1796 ntBASIC23.4■■□□□ 1.34
ZC3H3Q8IXZ2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
ZC3H3Q8IXZ2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.39■■□□□ 1.34
ZC3H3Q8IXZ2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
ZC3H3Q8IXZ2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.39■■□□□ 1.34
ZC3H3Q8IXZ2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
ZC3H3Q8IXZ2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.39■■□□□ 1.33
ZC3H3Q8IXZ2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
ZC3H3Q8IXZ2 SUDS3P1-201ENST00000505831 966 ntBASIC23.39■■□□□ 1.33
ZC3H3Q8IXZ2 AF213884.3-201ENST00000563833 479 ntBASIC23.39■■□□□ 1.33
ZC3H3Q8IXZ2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
ZC3H3Q8IXZ2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
ZC3H3Q8IXZ2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
ZC3H3Q8IXZ2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
ZC3H3Q8IXZ2 RASA4CP-201ENST00000424092 1398 ntBASIC23.39■■□□□ 1.33
ZC3H3Q8IXZ2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
ZC3H3Q8IXZ2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3H3Q8IXZ2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3H3Q8IXZ2 Z98882.1-201ENST00000622160 2253 ntBASIC23.38■■□□□ 1.33
ZC3H3Q8IXZ2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3H3Q8IXZ2 MIR638-201ENST00000385237 100 ntBASIC23.38■■□□□ 1.33
ZC3H3Q8IXZ2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3H3Q8IXZ2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3H3Q8IXZ2 AC104564.3-201ENST00000582367 638 ntBASIC23.38■■□□□ 1.33
ZC3H3Q8IXZ2 AL139246.5-201ENST00000606645 996 ntBASIC23.38■■□□□ 1.33
ZC3H3Q8IXZ2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.38■■□□□ 1.33
ZC3H3Q8IXZ2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3H3Q8IXZ2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3H3Q8IXZ2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3H3Q8IXZ2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3H3Q8IXZ2 TSPY26P-201ENST00000476365 1326 ntBASIC23.37■■□□□ 1.33
ZC3H3Q8IXZ2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms