Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr7Q8BU04 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr7Q8BU04 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ubr7Q8BU04 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr7Q8BU04 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubr7Q8BU04 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubr7Q8BU04 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.22■□□□□ 0.67
Ubr7Q8BU04 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.22■□□□□ 0.67
Ubr7Q8BU04 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.22■□□□□ 0.67
Ubr7Q8BU04 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubr7Q8BU04 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubr7Q8BU04 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubr7Q8BU04 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ubr7Q8BU04 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr7Q8BU04 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr7Q8BU04 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr7Q8BU04 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.21■□□□□ 0.67
Ubr7Q8BU04 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr7Q8BU04 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr7Q8BU04 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr7Q8BU04 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ubr7Q8BU04 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Ubr7Q8BU04 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr7Q8BU04 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr7Q8BU04 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubr7Q8BU04 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubr7Q8BU04 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubr7Q8BU04 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubr7Q8BU04 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ubr7Q8BU04 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ubr7Q8BU04 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Ubr7Q8BU04 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubr7Q8BU04 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Ubr7Q8BU04 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.2■□□□□ 0.66
Ubr7Q8BU04 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.2■□□□□ 0.66
Ubr7Q8BU04 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubr7Q8BU04 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ubr7Q8BU04 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubr7Q8BU04 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubr7Q8BU04 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubr7Q8BU04 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubr7Q8BU04 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ubr7Q8BU04 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Ubr7Q8BU04 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubr7Q8BU04 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubr7Q8BU04 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ubr7Q8BU04 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubr7Q8BU04 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.19■□□□□ 0.66
Ubr7Q8BU04 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ubr7Q8BU04 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubr7Q8BU04 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ubr7Q8BU04 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ubr7Q8BU04 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubr7Q8BU04 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubr7Q8BU04 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Ubr7Q8BU04 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubr7Q8BU04 Gm6211-202ENSMUST00000167849 925 ntBASIC19.18■□□□□ 0.66
Ubr7Q8BU04 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.18■□□□□ 0.66
Ubr7Q8BU04 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubr7Q8BU04 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.18■□□□□ 0.66
Ubr7Q8BU04 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ubr7Q8BU04 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ubr7Q8BU04 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ubr7Q8BU04 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubr7Q8BU04 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubr7Q8BU04 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ubr7Q8BU04 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubr7Q8BU04 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubr7Q8BU04 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubr7Q8BU04 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Ubr7Q8BU04 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ubr7Q8BU04 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubr7Q8BU04 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.17■□□□□ 0.66
Ubr7Q8BU04 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.17■□□□□ 0.66
Ubr7Q8BU04 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubr7Q8BU04 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubr7Q8BU04 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ubr7Q8BU04 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Ubr7Q8BU04 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubr7Q8BU04 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr7Q8BU04 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr7Q8BU04 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr7Q8BU04 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr7Q8BU04 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr7Q8BU04 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr7Q8BU04 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.16■□□□□ 0.66
Ubr7Q8BU04 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr7Q8BU04 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr7Q8BU04 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr7Q8BU04 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr7Q8BU04 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr7Q8BU04 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.16■□□□□ 0.66
Ubr7Q8BU04 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr7Q8BU04 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr7Q8BU04 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr7Q8BU04 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ubr7Q8BU04 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ubr7Q8BU04 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ubr7Q8BU04 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ubr7Q8BU04 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms