Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkl3Q8BLF2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cdkl3Q8BLF2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkl3Q8BLF2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Cdkl3Q8BLF2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.37■□□□□ 0.21
Cdkl3Q8BLF2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.37■□□□□ 0.21
Cdkl3Q8BLF2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkl3Q8BLF2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkl3Q8BLF2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkl3Q8BLF2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cdkl3Q8BLF2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.37■□□□□ 0.21
Cdkl3Q8BLF2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkl3Q8BLF2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cdkl3Q8BLF2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.37■□□□□ 0.21
Cdkl3Q8BLF2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkl3Q8BLF2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkl3Q8BLF2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkl3Q8BLF2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cdkl3Q8BLF2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkl3Q8BLF2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.36■□□□□ 0.21
Cdkl3Q8BLF2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkl3Q8BLF2 Fst-202ENSMUST00000223640 2612 ntBASIC16.36■□□□□ 0.21
Cdkl3Q8BLF2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkl3Q8BLF2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkl3Q8BLF2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkl3Q8BLF2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkl3Q8BLF2 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.36■□□□□ 0.21
Cdkl3Q8BLF2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.36■□□□□ 0.21
Cdkl3Q8BLF2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkl3Q8BLF2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkl3Q8BLF2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cdkl3Q8BLF2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkl3Q8BLF2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkl3Q8BLF2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkl3Q8BLF2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkl3Q8BLF2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkl3Q8BLF2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.36■□□□□ 0.21
Cdkl3Q8BLF2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl3Q8BLF2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.35■□□□□ 0.21
Cdkl3Q8BLF2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl3Q8BLF2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cdkl3Q8BLF2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Cdkl3Q8BLF2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl3Q8BLF2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl3Q8BLF2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl3Q8BLF2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.35■□□□□ 0.21
Cdkl3Q8BLF2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.35■□□□□ 0.21
Cdkl3Q8BLF2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.35■□□□□ 0.21
Cdkl3Q8BLF2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Cdkl3Q8BLF2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Cdkl3Q8BLF2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Cdkl3Q8BLF2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl3Q8BLF2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl3Q8BLF2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl3Q8BLF2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Cdkl3Q8BLF2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl3Q8BLF2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.34■□□□□ 0.21
Cdkl3Q8BLF2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl3Q8BLF2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl3Q8BLF2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl3Q8BLF2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl3Q8BLF2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdkl3Q8BLF2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.33■□□□□ 0.21
Cdkl3Q8BLF2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdkl3Q8BLF2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Cdkl3Q8BLF2 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.33■□□□□ 0.2
Cdkl3Q8BLF2 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.33■□□□□ 0.2
Cdkl3Q8BLF2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl3Q8BLF2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl3Q8BLF2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl3Q8BLF2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl3Q8BLF2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cdkl3Q8BLF2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl3Q8BLF2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl3Q8BLF2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl3Q8BLF2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cdkl3Q8BLF2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cdkl3Q8BLF2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl3Q8BLF2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl3Q8BLF2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl3Q8BLF2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl3Q8BLF2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl3Q8BLF2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cdkl3Q8BLF2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cdkl3Q8BLF2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Cdkl3Q8BLF2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Cdkl3Q8BLF2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl3Q8BLF2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl3Q8BLF2 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.32■□□□□ 0.2
Cdkl3Q8BLF2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cdkl3Q8BLF2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl3Q8BLF2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.32■□□□□ 0.2
Cdkl3Q8BLF2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl3Q8BLF2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl3Q8BLF2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl3Q8BLF2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl3Q8BLF2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl3Q8BLF2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl3Q8BLF2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl3Q8BLF2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms