Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CSMD3Q7Z407 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 MIR4758-201ENST00000577688 71 ntBASIC15.1■□□□□ 0.01
CSMD3Q7Z407 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 AC026366.1-201ENST00000488803 879 ntBASIC15.1■□□□□ 0.01
CSMD3Q7Z407 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 USP45-205ENST00000472914 1617 ntTSL 5 BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 AP003733.4-201ENST00000623785 1697 ntBASIC15.1■□□□□ 0.01
CSMD3Q7Z407 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD3Q7Z407 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.09■□□□□ 0.01
CSMD3Q7Z407 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.09■□□□□ 0.01
CSMD3Q7Z407 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD3Q7Z407 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.09■□□□□ 0.01
CSMD3Q7Z407 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CSMD3Q7Z407 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD3Q7Z407 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.09■□□□□ 0.01
CSMD3Q7Z407 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD3Q7Z407 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD3Q7Z407 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.09■□□□□ 0.01
CSMD3Q7Z407 AC091874.3-201ENST00000512672 1195 ntBASIC15.09■□□□□ 0.01
CSMD3Q7Z407 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.09■□□□□ 0.01
CSMD3Q7Z407 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD3Q7Z407 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD3Q7Z407 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD3Q7Z407 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD3Q7Z407 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.09■□□□□ 0.01
CSMD3Q7Z407 UNC93B5-201ENST00000530315 699 ntBASIC15.09■□□□□ 0.01
CSMD3Q7Z407 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD3Q7Z407 OXCT2P1-201ENST00000447263 1535 ntBASIC15.09■□□□□ 0.01
CSMD3Q7Z407 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD3Q7Z407 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CSMD3Q7Z407 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CSMD3Q7Z407 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.08■□□□□ 0.01
CSMD3Q7Z407 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CSMD3Q7Z407 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CSMD3Q7Z407 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CSMD3Q7Z407 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CSMD3Q7Z407 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.08■□□□□ 0
CSMD3Q7Z407 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC15.08■□□□□ 0
CSMD3Q7Z407 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CSMD3Q7Z407 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CSMD3Q7Z407 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CSMD3Q7Z407 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CSMD3Q7Z407 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.08■□□□□ 0
CSMD3Q7Z407 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CSMD3Q7Z407 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.08■□□□□ 0
CSMD3Q7Z407 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC15.08■□□□□ 0
CSMD3Q7Z407 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.08■□□□□ 0
CSMD3Q7Z407 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC15.08■□□□□ 0
CSMD3Q7Z407 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CSMD3Q7Z407 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CSMD3Q7Z407 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CSMD3Q7Z407 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSMD3Q7Z407 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CSMD3Q7Z407 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CSMD3Q7Z407 AC068587.7-201ENST00000641602 218 ntBASIC15.07■□□□□ 0
CSMD3Q7Z407 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.07■□□□□ 0
CSMD3Q7Z407 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CSMD3Q7Z407 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.07■□□□□ 0
CSMD3Q7Z407 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSMD3Q7Z407 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.07■□□□□ 0
CSMD3Q7Z407 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.07■□□□□ 0
CSMD3Q7Z407 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSMD3Q7Z407 THRA-202ENST00000394121 2260 ntTSL 2 BASIC15.07■□□□□ 0
CSMD3Q7Z407 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSMD3Q7Z407 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSMD3Q7Z407 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.06■□□□□ 0
CSMD3Q7Z407 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
CSMD3Q7Z407 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSMD3Q7Z407 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSMD3Q7Z407 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSMD3Q7Z407 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CSMD3Q7Z407 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSMD3Q7Z407 AL158047.1-201ENST00000445918 881 ntBASIC15.06■□□□□ 0
CSMD3Q7Z407 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSMD3Q7Z407 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC15.06■□□□□ 0
CSMD3Q7Z407 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.06■□□□□ 0
CSMD3Q7Z407 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.06■□□□□ 0
CSMD3Q7Z407 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC15.06■□□□□ 0
CSMD3Q7Z407 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms