Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
COL13A1Q5TAT6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC24.72■■□□□ 1.55
COL13A1Q5TAT6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
COL13A1Q5TAT6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC24.72■■□□□ 1.55
COL13A1Q5TAT6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
COL13A1Q5TAT6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC24.72■■□□□ 1.55
COL13A1Q5TAT6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC24.72■■□□□ 1.55
COL13A1Q5TAT6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL13A1Q5TAT6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL13A1Q5TAT6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC24.72■■□□□ 1.55
COL13A1Q5TAT6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.72■■□□□ 1.55
COL13A1Q5TAT6 AC005363.2-201ENST00000618631 242 ntBASIC24.72■■□□□ 1.55
COL13A1Q5TAT6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC24.72■■□□□ 1.55
COL13A1Q5TAT6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL13A1Q5TAT6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL13A1Q5TAT6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC24.71■■□□□ 1.55
COL13A1Q5TAT6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL13A1Q5TAT6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC24.71■■□□□ 1.55
COL13A1Q5TAT6 UPK3BP1-201ENST00000428678 509 ntBASIC24.71■■□□□ 1.55
COL13A1Q5TAT6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC24.71■■□□□ 1.55
COL13A1Q5TAT6 KRT18P56-201ENST00000507275 550 ntBASIC24.71■■□□□ 1.55
COL13A1Q5TAT6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.71■■□□□ 1.55
COL13A1Q5TAT6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL13A1Q5TAT6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC24.71■■□□□ 1.55
COL13A1Q5TAT6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
COL13A1Q5TAT6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC24.71■■□□□ 1.55
COL13A1Q5TAT6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL13A1Q5TAT6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL13A1Q5TAT6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC24.7■■□□□ 1.54
COL13A1Q5TAT6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
COL13A1Q5TAT6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
COL13A1Q5TAT6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.7■■□□□ 1.54
COL13A1Q5TAT6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC24.7■■□□□ 1.54
COL13A1Q5TAT6 AC069544.1-201ENST00000609399 999 ntBASIC24.7■■□□□ 1.54
COL13A1Q5TAT6 GPALPP1-207ENST00000611650 899 ntBASIC24.7■■□□□ 1.54
COL13A1Q5TAT6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
COL13A1Q5TAT6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL13A1Q5TAT6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
COL13A1Q5TAT6 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL13A1Q5TAT6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
COL13A1Q5TAT6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL13A1Q5TAT6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL13A1Q5TAT6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL13A1Q5TAT6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
COL13A1Q5TAT6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
COL13A1Q5TAT6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC24.69■■□□□ 1.54
COL13A1Q5TAT6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC24.69■■□□□ 1.54
COL13A1Q5TAT6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
COL13A1Q5TAT6 AC113410.3-201ENST00000623366 203 ntBASIC24.69■■□□□ 1.54
COL13A1Q5TAT6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
COL13A1Q5TAT6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL13A1Q5TAT6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL13A1Q5TAT6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
COL13A1Q5TAT6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
COL13A1Q5TAT6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
COL13A1Q5TAT6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
COL13A1Q5TAT6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC24.68■■□□□ 1.54
COL13A1Q5TAT6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL13A1Q5TAT6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL13A1Q5TAT6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL13A1Q5TAT6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC24.67■■□□□ 1.54
COL13A1Q5TAT6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC24.67■■□□□ 1.54
COL13A1Q5TAT6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
COL13A1Q5TAT6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
COL13A1Q5TAT6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.66■■□□□ 1.54
COL13A1Q5TAT6 AC096887.2-201ENST00000623443 1957 ntBASIC24.66■■□□□ 1.54
COL13A1Q5TAT6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL13A1Q5TAT6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL13A1Q5TAT6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC24.66■■□□□ 1.54
COL13A1Q5TAT6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC24.66■■□□□ 1.54
COL13A1Q5TAT6 KRT18P57-201ENST00000443599 1254 ntBASIC24.66■■□□□ 1.54
COL13A1Q5TAT6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC24.66■■□□□ 1.54
COL13A1Q5TAT6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC24.66■■□□□ 1.54
COL13A1Q5TAT6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC24.66■■□□□ 1.54
COL13A1Q5TAT6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC24.66■■□□□ 1.54
COL13A1Q5TAT6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL13A1Q5TAT6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.65■■□□□ 1.54
COL13A1Q5TAT6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.65■■□□□ 1.54
COL13A1Q5TAT6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
COL13A1Q5TAT6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL13A1Q5TAT6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC24.65■■□□□ 1.54
COL13A1Q5TAT6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
COL13A1Q5TAT6 AC010141.3-201ENST00000456659 717 ntBASIC24.65■■□□□ 1.54
COL13A1Q5TAT6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC24.65■■□□□ 1.54
COL13A1Q5TAT6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL13A1Q5TAT6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC24.65■■□□□ 1.54
COL13A1Q5TAT6 AC138907.5-202ENST00000569484 235 ntBASIC24.65■■□□□ 1.54
COL13A1Q5TAT6 HLA-B-256ENST00000639848 1089 ntBASIC24.65■■□□□ 1.54
COL13A1Q5TAT6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.65■■□□□ 1.54
COL13A1Q5TAT6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL13A1Q5TAT6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC24.64■■□□□ 1.54
COL13A1Q5TAT6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC24.64■■□□□ 1.54
COL13A1Q5TAT6 MMP23A-201ENST00000234610 1017 ntBASIC24.64■■□□□ 1.54
COL13A1Q5TAT6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC24.64■■□□□ 1.54
COL13A1Q5TAT6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
COL13A1Q5TAT6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC24.64■■□□□ 1.54
COL13A1Q5TAT6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC24.64■■□□□ 1.54
COL13A1Q5TAT6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
COL13A1Q5TAT6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC24.64■■□□□ 1.53
COL13A1Q5TAT6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms