Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H3AP68431 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H3AP68431 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H3AP68431 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
HIST1H3AP68431 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H3AP68431 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H3AP68431 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
HIST1H3AP68431 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H3AP68431 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.78■□□□□ 0.6
HIST1H3AP68431 AC027682.1-201ENST00000562846 899 ntBASIC18.78■□□□□ 0.6
HIST1H3AP68431 AC126544.1-201ENST00000580842 1059 ntBASIC18.78■□□□□ 0.6
HIST1H3AP68431 SMUG1P1-201ENST00000590640 811 ntBASIC18.78■□□□□ 0.6
HIST1H3AP68431 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.78■□□□□ 0.6
HIST1H3AP68431 AC008764.7-201ENST00000593779 1081 ntBASIC18.78■□□□□ 0.6
HIST1H3AP68431 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.78■□□□□ 0.6
HIST1H3AP68431 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H3AP68431 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HIST1H3AP68431 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H3AP68431 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.78■□□□□ 0.6
HIST1H3AP68431 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.78■□□□□ 0.6
HIST1H3AP68431 AC026471.6-201ENST00000622954 1905 ntBASIC18.78■□□□□ 0.6
HIST1H3AP68431 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.78■□□□□ 0.6
HIST1H3AP68431 AC244015.2-201ENST00000616358 1861 ntBASIC18.77■□□□□ 0.6
HIST1H3AP68431 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.77■□□□□ 0.6
HIST1H3AP68431 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST1H3AP68431 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST1H3AP68431 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.77■□□□□ 0.6
HIST1H3AP68431 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST1H3AP68431 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.77■□□□□ 0.6
HIST1H3AP68431 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST1H3AP68431 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.77■□□□□ 0.6
HIST1H3AP68431 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.77■□□□□ 0.6
HIST1H3AP68431 AC099791.1-201ENST00000416440 715 ntBASIC18.77■□□□□ 0.6
HIST1H3AP68431 AP001330.3-201ENST00000520123 633 ntBASIC18.77■□□□□ 0.6
HIST1H3AP68431 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.77■□□□□ 0.6
HIST1H3AP68431 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.77■□□□□ 0.6
HIST1H3AP68431 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.77■□□□□ 0.6
HIST1H3AP68431 AL031432.3-201ENST00000607698 485 ntBASIC18.77■□□□□ 0.6
HIST1H3AP68431 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.77■□□□□ 0.6
HIST1H3AP68431 AL355001.2-201ENST00000620617 1191 ntBASIC18.77■□□□□ 0.6
HIST1H3AP68431 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST1H3AP68431 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
HIST1H3AP68431 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.77■□□□□ 0.6
HIST1H3AP68431 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HIST1H3AP68431 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.77■□□□□ 0.6
HIST1H3AP68431 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST1H3AP68431 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
HIST1H3AP68431 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H3AP68431 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H3AP68431 AP004607.7-201ENST00000527152 1677 ntBASIC18.76■□□□□ 0.59
HIST1H3AP68431 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H3AP68431 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H3AP68431 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H3AP68431 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H3AP68431 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HIST1H3AP68431 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HIST1H3AP68431 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H3AP68431 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HIST1H3AP68431 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H3AP68431 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H3AP68431 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H3AP68431 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H3AP68431 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HIST1H3AP68431 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H3AP68431 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H3AP68431 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H3AP68431 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H3AP68431 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.75■□□□□ 0.59
HIST1H3AP68431 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H3AP68431 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
HIST1H3AP68431 MIR939-201ENST00000401314 82 ntBASIC18.75■□□□□ 0.59
HIST1H3AP68431 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.75■□□□□ 0.59
HIST1H3AP68431 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.75■□□□□ 0.59
HIST1H3AP68431 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H3AP68431 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H3AP68431 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H3AP68431 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H3AP68431 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H3AP68431 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H3AP68431 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H3AP68431 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H3AP68431 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.74■□□□□ 0.59
HIST1H3AP68431 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H3AP68431 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H3AP68431 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.74■□□□□ 0.59
HIST1H3AP68431 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.74■□□□□ 0.59
HIST1H3AP68431 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.74■□□□□ 0.59
HIST1H3AP68431 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HIST1H3AP68431 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.74■□□□□ 0.59
HIST1H3AP68431 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H3AP68431 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.74■□□□□ 0.59
HIST1H3AP68431 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H3AP68431 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H3AP68431 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.74■□□□□ 0.59
HIST1H3AP68431 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H3AP68431 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H3AP68431 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H3AP68431 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.73■□□□□ 0.59
HIST1H3AP68431 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H3AP68431 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms