Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TRA2BP62995 AL136967.2-201ENST00000623968 743 ntBASIC20.32■□□□□ 0.84
TRA2BP62995 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRA2BP62995 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRA2BP62995 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRA2BP62995 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRA2BP62995 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRA2BP62995 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.31■□□□□ 0.84
TRA2BP62995 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.31■□□□□ 0.84
TRA2BP62995 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRA2BP62995 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRA2BP62995 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TRA2BP62995 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.31■□□□□ 0.84
TRA2BP62995 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.31■□□□□ 0.84
TRA2BP62995 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRA2BP62995 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.31■□□□□ 0.84
TRA2BP62995 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.31■□□□□ 0.84
TRA2BP62995 AC104564.3-201ENST00000582367 638 ntBASIC20.31■□□□□ 0.84
TRA2BP62995 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.31■□□□□ 0.84
TRA2BP62995 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.31■□□□□ 0.84
TRA2BP62995 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.31■□□□□ 0.84
TRA2BP62995 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRA2BP62995 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.31■□□□□ 0.84
TRA2BP62995 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRA2BP62995 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRA2BP62995 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRA2BP62995 AC244015.2-201ENST00000616358 1861 ntBASIC20.3■□□□□ 0.84
TRA2BP62995 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRA2BP62995 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRA2BP62995 TSPY26P-201ENST00000476365 1326 ntBASIC20.3■□□□□ 0.84
TRA2BP62995 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRA2BP62995 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRA2BP62995 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRA2BP62995 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRA2BP62995 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.3■□□□□ 0.84
TRA2BP62995 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRA2BP62995 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRA2BP62995 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.29■□□□□ 0.84
TRA2BP62995 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.29■□□□□ 0.84
TRA2BP62995 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.29■□□□□ 0.84
TRA2BP62995 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.29■□□□□ 0.84
TRA2BP62995 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRA2BP62995 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRA2BP62995 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRA2BP62995 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRA2BP62995 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.29■□□□□ 0.84
TRA2BP62995 SUDS3P1-201ENST00000505831 966 ntBASIC20.29■□□□□ 0.84
TRA2BP62995 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRA2BP62995 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.29■□□□□ 0.84
TRA2BP62995 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.29■□□□□ 0.84
TRA2BP62995 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRA2BP62995 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRA2BP62995 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRA2BP62995 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRA2BP62995 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.28■□□□□ 0.84
TRA2BP62995 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRA2BP62995 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TRA2BP62995 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TRA2BP62995 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRA2BP62995 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.28■□□□□ 0.84
TRA2BP62995 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRA2BP62995 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRA2BP62995 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TRA2BP62995 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRA2BP62995 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRA2BP62995 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRA2BP62995 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRA2BP62995 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.27■□□□□ 0.84
TRA2BP62995 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRA2BP62995 MIR572-201ENST00000384983 95 ntBASIC20.27■□□□□ 0.84
TRA2BP62995 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.27■□□□□ 0.84
TRA2BP62995 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRA2BP62995 AC105233.4-201ENST00000642045 216 ntBASIC20.27■□□□□ 0.84
TRA2BP62995 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRA2BP62995 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRA2BP62995 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRA2BP62995 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRA2BP62995 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRA2BP62995 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRA2BP62995 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRA2BP62995 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRA2BP62995 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRA2BP62995 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRA2BP62995 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRA2BP62995 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.26■□□□□ 0.83
TRA2BP62995 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.26■□□□□ 0.83
TRA2BP62995 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.26■□□□□ 0.83
TRA2BP62995 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TRA2BP62995 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRA2BP62995 AC009237.3-201ENST00000393279 1427 ntBASIC20.26■□□□□ 0.83
TRA2BP62995 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRA2BP62995 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRA2BP62995 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRA2BP62995 AC026471.6-201ENST00000622954 1905 ntBASIC20.25■□□□□ 0.83
TRA2BP62995 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRA2BP62995 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRA2BP62995 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRA2BP62995 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.25■□□□□ 0.83
TRA2BP62995 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.25■□□□□ 0.83
TRA2BP62995 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms