Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.49■□□□□ 0.87
SSR2P43308 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR2P43308 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR2P43308 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.49■□□□□ 0.87
SSR2P43308 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR2P43308 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR2P43308 LINC00565-201ENST00000562710 2331 ntBASIC20.49■□□□□ 0.87
SSR2P43308 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR2P43308 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR2P43308 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR2P43308 FAM99A-202ENST00000538190 1989 ntBASIC20.48■□□□□ 0.87
SSR2P43308 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR2P43308 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR2P43308 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR2P43308 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR2P43308 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.48■□□□□ 0.87
SSR2P43308 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.48■□□□□ 0.87
SSR2P43308 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.48■□□□□ 0.87
SSR2P43308 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.48■□□□□ 0.87
SSR2P43308 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR2P43308 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR2P43308 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SSR2P43308 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR2P43308 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.48■□□□□ 0.87
SSR2P43308 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR2P43308 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.48■□□□□ 0.87
SSR2P43308 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.47■□□□□ 0.87
SSR2P43308 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR2P43308 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR2P43308 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR2P43308 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SSR2P43308 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SSR2P43308 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
SSR2P43308 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.47■□□□□ 0.87
SSR2P43308 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SSR2P43308 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.47■□□□□ 0.87
SSR2P43308 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.47■□□□□ 0.87
SSR2P43308 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.47■□□□□ 0.87
SSR2P43308 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.47■□□□□ 0.87
SSR2P43308 AL034346.1-201ENST00000568244 1277 ntBASIC20.47■□□□□ 0.87
SSR2P43308 SMUG1P1-201ENST00000590640 811 ntBASIC20.47■□□□□ 0.87
SSR2P43308 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.47■□□□□ 0.87
SSR2P43308 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR2P43308 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.47■□□□□ 0.87
SSR2P43308 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR2P43308 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SSR2P43308 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR2P43308 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SSR2P43308 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR2P43308 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR2P43308 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR2P43308 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR2P43308 AP004607.7-201ENST00000527152 1677 ntBASIC20.46■□□□□ 0.87
SSR2P43308 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR2P43308 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR2P43308 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SSR2P43308 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.46■□□□□ 0.87
SSR2P43308 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR2P43308 AC105233.4-201ENST00000642045 216 ntBASIC20.46■□□□□ 0.87
SSR2P43308 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SSR2P43308 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR2P43308 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR2P43308 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR2P43308 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SSR2P43308 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SSR2P43308 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.46■□□□□ 0.87
SSR2P43308 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SSR2P43308 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.46■□□□□ 0.87
SSR2P43308 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
SSR2P43308 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SSR2P43308 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.45■□□□□ 0.86
SSR2P43308 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.45■□□□□ 0.86
SSR2P43308 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSR2P43308 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SSR2P43308 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.45■□□□□ 0.86
SSR2P43308 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SSR2P43308 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSR2P43308 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SSR2P43308 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.45■□□□□ 0.86
SSR2P43308 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSR2P43308 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSR2P43308 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSR2P43308 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.44■□□□□ 0.86
SSR2P43308 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSR2P43308 MIR572-201ENST00000384983 95 ntBASIC20.44■□□□□ 0.86
SSR2P43308 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
SSR2P43308 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.44■□□□□ 0.86
SSR2P43308 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSR2P43308 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSR2P43308 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SSR2P43308 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSR2P43308 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSR2P43308 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SSR2P43308 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSR2P43308 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.43■□□□□ 0.86
SSR2P43308 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.43■□□□□ 0.86
SSR2P43308 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR2P43308 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SSR2P43308 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR2P43308 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms