Protein–RNA interactions for Protein: P42843

SKP2, F-box protein SKP2, yeast

Predictions only

Length 763 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	P42843	SLI1	YGR212W	1407 nt		4.19	□□□□□ -1.74
SKP2	P42843	VPS45	YGL095C	1734 nt		4.18	□□□□□ -1.74
SKP2	P42843	EGT2	YNL327W	3126 nt		4.18	□□□□□ -1.74
SKP2	P42843	NOP6	YDL213C	678 nt		4.18	□□□□□ -1.74
SKP2	P42843	YGL204C	YGL204C	306 nt		4.18	□□□□□ -1.74
SKP2	P42843	YJL156W-A	YJL156W-A	222 nt		4.18	□□□□□ -1.74
SKP2	P42843	MAP1	YLR244C	1164 nt		4.18	□□□□□ -1.74
SKP2	P42843	SFH1	YLR321C	1281 nt		4.18	□□□□□ -1.74
SKP2	P42843	MED11	YMR112C	396 nt		4.18	□□□□□ -1.74
SKP2	P42843	ATP20	YPR020W	348 nt		4.18	□□□□□ -1.74
SKP2	P42843	CBP6	YBR120C	489 nt		4.18	□□□□□ -1.74
SKP2	P42843	PEX30	YLR324W	1572 nt		4.18	□□□□□ -1.74
SKP2	P42843	BIK1	YCL029C	1323 nt		4.18	□□□□□ -1.74
SKP2	P42843	MRH4	YGL064C	1686 nt		4.17	□□□□□ -1.74
SKP2	P42843	BUD6	YLR319C	2367 nt		4.17	□□□□□ -1.74
SKP2	P42843	RPL8A	YHL033C	771 nt		4.17	□□□□□ -1.74
SKP2	P42843	YJL032W	YJL032W	315 nt		4.17	□□□□□ -1.74
SKP2	P42843	AUR1	YKL004W	1206 nt		4.17	□□□□□ -1.74
SKP2	P42843	YLR428C	YLR428C	345 nt		4.17	□□□□□ -1.74
SKP2	P42843	SAM37	YMR060C	984 nt		4.17	□□□□□ -1.74
SKP2	P42843	VPS20	YMR077C	666 nt		4.17	□□□□□ -1.74
SKP2	P42843	RUF5-1	RUF5-1	710 nt		4.17	□□□□□ -1.74
SKP2	P42843	RUF5-2	RUF5-2	710 nt		4.17	□□□□□ -1.74
SKP2	P42843	RPS19A	YOL121C	435 nt		4.17	□□□□□ -1.74
SKP2	P42843	MRPL27	YBR282W	441 nt		4.17	□□□□□ -1.74
SKP2	P42843	Q0017	Q0017	162 nt		4.17	□□□□□ -1.74
SKP2	P42843	YJR061W	YJR061W	2808 nt		4.17	□□□□□ -1.74
SKP2	P42843	VPS30	YPL120W	1674 nt		4.16	□□□□□ -1.74
SKP2	P42843	SSU1	YPL092W	1377 nt		4.16	□□□□□ -1.74
SKP2	P42843	YIG1	YPL201C	1386 nt		4.16	□□□□□ -1.74
SKP2	P42843	LSM4	YER112W	564 nt		4.16	□□□□□ -1.74
SKP2	P42843	EST3	YIL009C-A	546 nt		4.16	□□□□□ -1.74
SKP2	P42843	REE1	YJL217W	597 nt		4.16	□□□□□ -1.74
SKP2	P42843	BNA1	YJR025C	534 nt		4.16	□□□□□ -1.74
SKP2	P42843	AHP1	YLR109W	531 nt		4.16	□□□□□ -1.74
SKP2	P42843	FMP41	YNL168C	780 nt		4.16	□□□□□ -1.74
SKP2	P42843	MRPL51	YPR100W	423 nt		4.16	□□□□□ -1.74
SKP2	P42843	POL1	YNL102W	4407 nt		4.16	□□□□□ -1.74
SKP2	P42843	YDR131C	YDR131C	1671 nt		4.16	□□□□□ -1.74
SKP2	P42843	UBX5	YDR330W	1503 nt		4.16	□□□□□ -1.74
SKP2	P42843	TRM12	YML005W	1389 nt		4.15	□□□□□ -1.74
SKP2	P42843	GPM2	YDL021W	936 nt		4.15	□□□□□ -1.75
SKP2	P42843	FMP32	YFL046W	624 nt		4.15	□□□□□ -1.75
SKP2	P42843	CWC23	YGL128C	852 nt		4.15	□□□□□ -1.75
SKP2	P42843	AIM22	YJL046W	1230 nt		4.15	□□□□□ -1.75
SKP2	P42843	GCD14	YJL125C	1152 nt		4.15	□□□□□ -1.75
SKP2	P42843	YJL218W	YJL218W	591 nt		4.15	□□□□□ -1.75
SKP2	P42843	MET14	YKL001C	609 nt		4.15	□□□□□ -1.75
SKP2	P42843	COX19	YLL018C-A	297 nt		4.15	□□□□□ -1.75
SKP2	P42843	ISA1	YLL027W	753 nt		4.15	□□□□□ -1.75
SKP2	P42843	YAP7	YOL028C	738 nt		4.15	□□□□□ -1.75
SKP2	P42843	POP4	YBR257W	840 nt		4.15	□□□□□ -1.75
SKP2	P42843	PUB1	YNL016W	1362 nt		4.14	□□□□□ -1.75
SKP2	P42843	KIP3	YGL216W	2418 nt		4.14	□□□□□ -1.75
SKP2	P42843	VBA2	YBR293W	1425 nt		4.14	□□□□□ -1.75
SKP2	P42843	PRS5	YOL061W	1491 nt		4.14	□□□□□ -1.75
SKP2	P42843	GRX3	YDR098C	858 nt		4.14	□□□□□ -1.75
SKP2	P42843	YDR355C	YDR355C	303 nt		4.14	□□□□□ -1.75
SKP2	P42843	YEL010W	YEL010W	351 nt		4.14	□□□□□ -1.75
SKP2	P42843	COX6	YHR051W	447 nt		4.14	□□□□□ -1.75
SKP2	P42843	YLL037W	YLL037W	381 nt		4.14	□□□□□ -1.75
SKP2	P42843	TRI1	YMR233W	681 nt		4.14	□□□□□ -1.75
SKP2	P42843	CAF20	YOR276W	486 nt		4.14	□□□□□ -1.75
SKP2	P42843	YBR053C	YBR053C	1077 nt		4.14	□□□□□ -1.75
SKP2	P42843	DIM1	YPL266W	957 nt		4.14	□□□□□ -1.75
SKP2	P42843	YBR096W	YBR096W	693 nt		4.14	□□□□□ -1.75
SKP2	P42843	MTH1	YDR277C	1302 nt		4.14	□□□□□ -1.75
SKP2	P42843	RPN9	YDR427W	1182 nt		4.13	□□□□□ -1.75
SKP2	P42843	PCD1	YLR151C	1023 nt		4.13	□□□□□ -1.75
SKP2	P42843	YMR158C-A	YMR158C-A	138 nt		4.13	□□□□□ -1.75
SKP2	P42843	TRM112	YNR046W	408 nt		4.13	□□□□□ -1.75
SKP2	P42843	YBR103C-A	YBR103C-A	144 nt		4.13	□□□□□ -1.75
SKP2	P42843	HFD1	YMR110C	1599 nt		4.13	□□□□□ -1.75
SKP2	P42843	NAT1	YDL040C	2565 nt		4.12	□□□□□ -1.75
SKP2	P42843	MNR2	YKL064W	2910 nt		4.12	□□□□□ -1.75
SKP2	P42843	SST2	YLR452C	2097 nt		4.12	□□□□□ -1.75
SKP2	P42843	RRN11	YML043C	1524 nt		4.12	□□□□□ -1.75
SKP2	P42843	BI3	Q0115	1554 nt		4.12	□□□□□ -1.75
SKP2	P42843	ORC4	YPR162C	1590 nt		4.12	□□□□□ -1.75
SKP2	P42843	NHP10	YDL002C	612 nt		4.12	□□□□□ -1.75
SKP2	P42843	YDL094C	YDL094C	510 nt		4.12	□□□□□ -1.75
SKP2	P42843	YEA4	YEL004W	1029 nt		4.12	□□□□□ -1.75
SKP2	P42843	MAG1	YER142C	891 nt		4.12	□□□□□ -1.75
SKP2	P42843	CAP2	YIL034C	864 nt		4.12	□□□□□ -1.75
SKP2	P42843	RSM25	YIL093C	795 nt		4.12	□□□□□ -1.75
SKP2	P42843	YAR075W	YAR075W	474 nt		4.12	□□□□□ -1.75
SKP2	P42843	YLR347W-A	YLR347W-A	141 nt		4.12	□□□□□ -1.75
SKP2	P42843	YML053C	YML053C	639 nt		4.12	□□□□□ -1.75
SKP2	P42843	TEM1	YML064C	738 nt		4.12	□□□□□ -1.75
SKP2	P42843	SRL4	YPL033C	846 nt		4.12	□□□□□ -1.75
SKP2	P42843	RPS11B	YBR048W	471 nt		4.12	□□□□□ -1.75
SKP2	P42843	ISW2	YOR304W	3363 nt		4.11	□□□□□ -1.75
SKP2	P42843	YRM1	YOR172W	2361 nt		4.11	□□□□□ -1.75
SKP2	P42843	YVH1	YIR026C	1095 nt		4.11	□□□□□ -1.75
SKP2	P42843	ASC1	YMR116C	960 nt		4.11	□□□□□ -1.75
SKP2	P42843	MCT1	YOR221C	1083 nt		4.11	□□□□□ -1.75
SKP2	P42843	YPL025C	YPL025C	558 nt		4.11	□□□□□ -1.75
SKP2	P42843	NUP85	YJR042W	2235 nt		4.11	□□□□□ -1.75
SKP2	P42843	TOG1	YER184C	2385 nt		4.11	□□□□□ -1.75
SKP2	P42843	APM3	YBR288C	1452 nt		4.11	□□□□□ -1.75

Retrieved 100 of 7,029 protein–RNA pairs in 24.1 ms